Sulfitobacter sp. JL08: C1J05_16995
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Entry
C1J05_16995 CDS
T05585
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
suli
Sulfitobacter sp. JL08
Pathway
suli03030
DNA replication
suli03430
Mismatch repair
suli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1J05_16995
03430 Mismatch repair
C1J05_16995
03440 Homologous recombination
C1J05_16995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suli03032
]
C1J05_16995
03400 DNA repair and recombination proteins [BR:
suli03400
]
C1J05_16995
Enzymes [BR:
suli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1J05_16995
DNA replication proteins [BR:
suli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1J05_16995
DNA repair and recombination proteins [BR:
suli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1J05_16995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AXI55969
UniProt:
A0A345REI2
LinkDB
All DBs
Position
complement(3450847..3454359)
Genome browser
AA seq
1170 aa
AA seq
DB search
MSDSPRFIHLRVHTEYSLLEGAVRLKKLPDLCRAAQMPAVAITDTNNMFAALEFSVAASG
AGIQPIIGCQVDLAYQITLPGERVKPPAPLVLLAQSEVGYENLMKLNTCLYVGKGDQLPQ
VTLEELEAHSKGLICLSGGPDGPVGRLLQANQRPAAEALMTQLAKMFDSRLYVELQRHPG
EDGQPENERLTERGFVEMAYAMDLPLVATNDVYFPKSDMYEAHDALICIADGAYVDQQQD
RRRLTAQHYFKSQQEMVTLFADLPEAIENTVEIAQRCAFQAYRRDPILPKFADDEVEELR
RQAQDGLKERLKVIPHAASVEEYEKRLEFELGIIEGMGFPGYFLIVADFIKWAKDHDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIQYV
QGKYGRDRVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALK
DEPRLREEARNEEVVARLLEYGQQVEGLLRNASTHAAGVVIGDRPLDALVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNALDLIKASGRHLHIAADGTELYDPPEVAI
DDIGAIPLDDEASYKLYAAAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPTYCEVKNGLKERENLHPTIDHILDETQGIIVYQEQVMQIAQDMAGYSLGGADLLRR
AMGKKIQEAMDAERPKFLKGSAVNGVDEPKAIEVWNLLDKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDLHQAEKLAVYFEEVRKGLNLPWVPPCVNRSEPTFTVVDGA
LVYALGALKNVGVEAMKLITEGRRVDGVEKPFSTLFDLARRVDLKRVGKRPLEMLARSGA
FDQLDSNRRRVFDALDPLVAYSAAIHEQKASNQVSLFGEAGDDLPEPRLMPVEDWLPAER
LNEEFKAIGFYLSGHPLDDYMGPLKRKGVMTLDDVRARAESGPHLAKMAGVVAGRQERKS
ARGNRFAFAQLSDTTGAYEVTLFSDTLELARDHLETGSKVVITVEATMESDQLKLLGRSV
APIDAAVADIGGMGLRIFVDDPAAITSVASVLDGAIKATKTGSKGPIQFCLMNPELPGEV
DIDLGQDFPVTPQIKGAIKSLGGVLEVEEI
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcccccgattcatccacctgcgcgttcacaccgaatactcccttctggaa
ggggccgtgcggttgaaaaagctgcctgatctgtgccgcgcagcccagatgccggccgtt
gcgatcaccgataccaacaacatgtttgccgcgctcgagttttccgttgcggccagcggt
gcgggcatccagccgattatcgggtgtcaggtggatctggcctatcagattaccctgccc
ggtgaacgggtcaaaccacctgcgccgcttgtgttgcttgctcaatccgaggtcggatac
gaaaatctgatgaagctgaacacctgcctgtatgtcggcaagggggatcagttgccccag
gtcacgcttgaggagcttgaggcgcattcaaaaggtctgatttgtctgtccggtgggcct
gacggacctgtcggacggttgttgcaagccaatcagcgccccgccgccgaggcgctgatg
acgcaactggcaaagatgtttgatagccgcctttatgtcgaattgcagcgccatccgggg
gaagacgggcaacctgaaaacgaacggctgaccgaacgcgggtttgttgaaatggcctat
gcgatggatctgccgctggtggcgaccaacgatgtctattttcccaaatcagacatgtac
gaagcccatgatgcgctgatctgcattgccgacggcgcttatgtcgatcagcaacaggat
cgccgccgcctgaccgcgcagcattatttcaaatcccagcaggaaatggtgacgctgttc
gctgatttgccggaagcgattgaaaacacggtcgaaatcgcgcaacgctgcgcgtttcag
gcttatcgccgtgatccgatcctgcccaaattcgccgatgacgaggtcgaggaattgcga
cggcaggcgcaggacgggttgaaagaacgccttaaggttattccccacgcggccagcgtg
gaagagtatgaaaaacggcttgaatttgagctgggcattatcgagggcatgggctttccc
ggctatttcctgatcgttgccgatttcatcaaatgggccaaggatcacgatattcctgtc
ggtccggggcgcgggtccggtgcgggatcgctggtggcttatgcgttgaccatcaccgat
ctggacccgttgcgctattcgttgctgtttgaacggtttctgaaccctgaacgtgtcagc
atgcctgatttcgatatcgatttctgtatggatcgccgcgaagaggtgatccagtacgtg
cagggcaaatacgggcgtgatcgcgtgggtcagatcatcacgttcggggcgctgctgtcc
aaggcggcggtacgtgacatcgggcgcgtgttgcagatgccttacgggcaggtggatcgt
ctttccaagatgatcccggtcgaaggtgtcaaacccgtcagtatcgaaaaggcgctgaaa
gacgaaccgcgcctgcgcgaagaggcccgcaacgaagaggttgtcgcgcggttgctggaa
tatggccagcaggtcgaaggtttgctgcgcaatgcatcaacgcacgctgccggtgtcgta
attggcgacaggccgctggatgcgctggtgccgctctatcaggatccgcgatccgatatg
cctgcgacgcagttcaatatgaaatgggtggaacaggccggactggtcaagttcgacttt
ctgggtctgaaaaccctgaccgtgatccagaatgcgctggacctgatcaaggcatcgggg
cggcatctgcacatcgcggcggacgggacagagctatatgacccgcccgaagttgcgatt
gacgatatcggggcgatcccgctggatgacgaggcatcttacaagctttatgccgcagcc
aaaacggttgcggtgtttcaggtggaaagttcaggcatgatggatgccctgaagcggatg
aaacccacctgtattgaagatattgtggcgcttgtggcgctgtaccggcccggcccgatg
gaaaacattccgacctattgcgaggtcaagaacgggttgaaggaacgggagaacctgcac
cccactattgatcatattctggacgagacccagggcatcatcgtttatcaggaacaggtg
atgcagatcgcgcaggatatggcgggctacagccttggcggtgccgacctgttgcgccgc
gcgatgggcaagaaaattcaggaagcgatggatgcggaacgtcccaagtttctgaaggga
tcggccgtaaacggggtggatgaacccaaggcgatcgaagtctggaacctgctggataaa
ttcgccaattacgggttcaacaaatcccacgccgccgcctatgccgttgtcagttatcag
accgcttggctcaaggcgaaccatccggttgaattcatggccggtgtgatgaactgcgat
cttcatcaggccgaaaagctggcagtctatttcgaagaagtgcgcaaggggctgaacctg
ccgtgggtgccgccttgcgtcaaccggtctgaaccgacgtttactgtggttgacggggcg
ctggtatatgcgctgggcgcgttgaagaacgttggcgtcgaggcgatgaaactgatcacc
gaaggccgtcgcgttgacggtgtggaaaaacccttttccacattgttcgatctggcgcgg
cgggttgatctgaagcgggtcggcaaacgcccgctggaaatgctggcacgctcgggtgct
tttgatcaactcgacagcaaccgccgccgcgtctttgatgcgcttgatcccctggttgcc
tattcggcggcgatccatgaacaaaaggcatcaaatcaggtgtcgttgtttggtgaagcg
ggcgatgatctgcccgaaccgcgcctgatgccggtagaagactggttgccggccgaacgt
ctgaacgaagaattcaaggccatcgggttttatctgtccggccacccgctggatgactac
atgggtcccttgaagcgcaagggcgtgatgacgctggacgatgttcgggcgcgcgctgaa
agcgggccgcatctggccaaaatggccggcgttgtggcggggcggcaggaacgaaaatcg
gcccgcggaaaccgttttgcctttgcgcagctttcagacaccaccggcgcctacgaagtg
acgctgttttcggatacgcttgaactggcgcgggatcatctggaaaccggatcaaaggtt
gtgatcaccgtcgaggcgacgatggaaagcgaccagttgaaattgctgggccgttcggtc
gcgccgattgacgcggctgtcgccgatatcggcggcatgggcctgcgtattttcgttgat
gaccccgccgcgatcacatcggttgcatcggttctggatggtgcgatcaaggcgacgaaa
acgggcagcaaggggccgatacagttctgtctgatgaaccctgaactgcccggagaagtc
gatattgatctggggcaggattttcctgtgacgccgcagatcaagggcgccatcaaaagc
cttggcggcgttctggaagttgaggaaatctga
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