Sulfitobacter sp. JL08: C1J05_20740
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Entry
C1J05_20740 CDS
T05585
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
suli
Sulfitobacter sp. JL08
Brite
KEGG Orthology (KO) [BR:
suli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suli03400
]
C1J05_20740 (addB)
Enzymes [BR:
suli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1J05_20740 (addB)
DNA repair and recombination proteins [BR:
suli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C1J05_20740 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AXI56612
UniProt:
A0A345RGC5
LinkDB
All DBs
Position
complement(4235415..4238360)
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AA seq
981 aa
AA seq
DB search
MFDPTDRPRVFGLPLGADFPKALVDGLIARHKDQPPEKLTRVTVIVNTQRMARRIRDLFD
AGPPMLLPRIQVITDLGQGAVGAGIPPAVPALRRRLELSQLIGTLLEKEPDLASRAALFD
LSDSLAALMDEMHGEGVSPDAISALDVSDQSGHWERTKTFISIIKKYFDGATSEPDVETR
QRLVVSALAAHWASNPPKDPVIVAGSTGSRGTTMMLMQAVAKLSQGALILPGFDFDLPED
VWTKLDDPLLSEDHPQYRYRKLMLALGLRPADISNWGADIGPDVAARNRLVSLSLRPAPF
TDAWLAEGPALPDIAGATQGVTLVQARHPRDEALAVALRLRQAAEDGQTAALITPDRMLT
RRVTAALDQWNIAPDDSAGQPLHLSPPGRFLRHVAQLFSQKMSAELLFTLLKHPLCHSGG
SRNQHLLFTRDLELYLRRTAPPYPKESDFRAWASQHDHPAAPDWANWLGNTVPGNATGDA
RPLSVWSQIHIDLSQRLSAGSAPEDSGELWLKNAGQSALQVMQSVEREAASAGDMSAFDY
NNLIGNLLSQGEVRDRDDNTPGIMIWGTLEARVQGAELLILGGLNEGIWPAAPTPDPWLN
RTLRDRAGLLLPERRIGLSAHDYQQAVSAKEIWLTRSVRSEDAETVASRWINRLTNLMRG
LPEQGGLKCLADMTARGDEWLARTRELERVSPVAPAPRPSPRPPVAARPRKLAVTDIKRL
IRDPYAIYAKHILKLRPLDPLVQSPDAPLRGTLIHTILEQFVRQTVQDPSSLTKDMLMQI
ADQVLDEKAPWPATKLVWRARLERVADWFLEREEERRRHATPLVFEKDARGIVVLPELGF
EIKGFADRIDQDETGTVYLYDYKTGQPPSAAEQRKFDKQLLLEAAMIEAGGFESVGPATV
ARAVFIGLGSKPTEVEAPLQDEPAAKIWEELKELIAAYLDPAQGFTARRMLQKDTDKGDY
DQLSRFGEWDNSDDPTPEDLT
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatccgacagaccgcccaagggtttttggcctgccattgggtgcagattttccc
aaggcgttggttgatggcctgattgcacgccacaaagaccaaccacccgaaaagctgacg
cgcgtcacagtgatcgtgaacacacagcggatggcccgccgtatccgcgatctgtttgat
gccggaccaccgatgttattgccgcgcattcaggtcatcacagaccttgggcaaggcgct
gttggtgcgggcattccgccggctgttcccgctttgcgccggcggctggagttgtcgcaa
ctgattggcactttgctggaaaaagaacctgatcttgcatcccgcgctgccttgttcgac
ctttccgatagtctggccgcactaatggacgaaatgcacggcgaaggcgtttcccccgat
gccatatcggcactggatgtttctgatcagtcaggacactgggagcgcactaagacattc
atttccattatcaaaaagtattttgacggagccacatccgaacccgatgtggaaacccgc
cagcgccttgtcgtttccgcgctggccgcgcattgggcgtcaaacccgcccaaagaccct
gttatcgtcgccggttccaccggatcgcggggaacgacgatgatgttgatgcaggccgtt
gcaaagctctcccaaggcgcgctgatcttgccgggattcgactttgatcttccggaagac
gtgtggaccaagctggacgatccgctgctgtccgaggatcacccgcaataccggtaccgc
aagctgatgctggcattgggattgcgacctgccgacatatcaaactggggtgctgatatc
gggccggatgtcgcagcccgcaaccggttggtttccctgtctttgcgccctgccccgttc
accgatgcctggctggccgaaggccctgccctgccggatatcgctggcgcgacacaaggc
gtgaccctggttcaggcccgtcatcccagagatgaggcgctggccgttgcgttgcgcttg
cgtcaagccgccgaggatggccagaccgccgcgctgattacgcctgacagaatgctgaca
cgacgtgttacggcggcgcttgatcaatggaacatcgcacctgatgacagtgcgggccag
cccttgcacctttcgccgccgggccggttcttgcgccatgtcgcacagcttttttcacag
aaaatgtctgcggaactcctgtttacactgctcaagcatcccttgtgtcacagtggcgga
agccgcaatcagcacttgttgttcacgcgggatcttgagctttatttgcgcaggactgcc
ccgccctaccccaaggaatccgatttcagggcctgggcgagccagcacgaccatcccgcc
gcgccggactgggccaactggctgggcaacacggtgccgggcaatgccaccggtgacgca
cgccccttgtccgtctggtcacagatacacatcgatctttcccaacggctttcggcaggg
tccgcgccggaagattccggcgaactgtggcttaagaatgcggggcagtcggcgcttcag
gtcatgcaatcggtcgagcgcgaggccgcatctgccggggatatgtcggcctttgattac
aacaatctgatcggcaacctgctgtctcagggcgaggtgcgcgacagggatgacaacacg
cccggcatcatgatctggggtacgcttgaggcgcgggtgcaaggcgccgaactgctgatc
ctgggcggtttgaacgaaggcatctggcctgccgccccgacccccgatccctggttgaac
cggacattgcgcgatcgcgccggattgctactgccggaacggcgtatcggcctgtccgca
catgattatcaacaagccgtttcggcaaaggaaatctggctgacacgttcagtgcggtcg
gaagacgctgaaaccgttgcctccagatggatcaaccgcctgaccaatctgatgcggggt
ttgccggaacagggcggtctgaaatgcctggcggacatgaccgcacgcggcgatgaatgg
cttgccagaacacgagagttggagcgtgtttcacccgttgcccccgccccgcgcccatcg
ccaagaccccccgttgcagcaagaccgcgcaagttggccgtgactgacattaagcgtctg
atccgggatccttatgcgatttatgccaaacatattttaaaactgcgtccgcttgatcca
ctggttcagtcccccgatgcgccgttgcgggggacattgatacacacgattctggaacaa
ttcgtacgccagacggtgcaagacccatccagcttgaccaaagacatgttgatgcagatt
gcagatcaggtgctggatgaaaaagcgccgtggcccgcaacgaaactggtttggcgtgcg
cggctggaacgcgtcgccgactggtttctggagcgtgaagaagaacggcgccggcacgcg
acgcctttggtttttgaaaaggacgcccgcggtatcgttgtgctgccggaactgggtttt
gaaataaaggggtttgcagaccggattgatcaggacgaaaccggcactgtctatctttat
gattacaaaaccggccaaccgcccagcgcggccgaacagcggaaattcgataaacagttg
ctgctggaagccgcgatgatcgaagccggtggtttcgaaagcgtcgggccggcaactgtt
gcgcgtgccgttttcatcggtctgggttccaaaccgaccgaagttgaagcgccgcttcag
gacgaaccggcggcaaaaatctgggaagagctcaaagaactgatcgctgcctatctggat
cctgcccaagggtttacggcgcggcgcatgctgcaaaaagacactgataaaggcgattac
gatcaattgtcgcggtttggtgaatgggacaacagcgacgatccaacacccgaggatttg
acgtga
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