Sulfurospirillum diekertiae JPD-1: SJPD1_0007
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Entry
SJPD1_0007 CDS
T05109
Name
(GenBank) uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sulj
Sulfurospirillum diekertiae JPD-1
Pathway
sulj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sulj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SJPD1_0007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulj03400
]
SJPD1_0007
Enzymes [BR:
sulj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SJPD1_0007
DNA repair and recombination proteins [BR:
sulj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SJPD1_0007
Prokaryotic type
SJPD1_0007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
ATB68142
UniProt:
A0A290H988
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All DBs
Position
8317..8991
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AA seq
224 aa
AA seq
DB search
MVDPKIEESWKNVLREEFQKPYFEALKSFLVEEKTHYTVYPSGANIFAAFDNTPFESVEV
VILGQDPYHGASQAHGLSFSVQDGIQHPPSLQNIFKELKDDLGCTIPKNGNLTAWAKQGV
FLLNTVLTVRASEANSHRGQGWENFTDAVIKTLSTEKEHLVFILWGSPAGAKASLIDGKK
HLILRAPHPSPLSSYRGFFGSKPFSKSNEYLTCNGKKPINWCLA
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggtagacccaaaaattgaagagagttggaaaaatgttttacgtgaagagtttcaaaag
ccctattttgaagctttaaaaagctttttagtggaagaaaaaacacactatactgtttat
cctagtggtgcaaacatctttgcggcatttgataacacaccctttgagagcgttgaagtg
gtcattttagggcaagatccttatcatggagcgagccaggcacatgggctctctttctct
gtacaagacggcatccagcatccgccatcccttcaaaatatttttaaagagcttaaagat
gatttgggttgtaccattcctaaaaatggtaatttaactgcgtgggcaaagcaaggtgtc
tttttactcaacaccgttttaaccgtgcgtgctagcgaagctaattcacaccgcggacaa
ggttgggaaaactttacagatgctgtgattaagacgttaagcactgaaaaagagcatttg
gtatttattctttggggcagtccagcaggtgcaaaagcgagcctcattgatggtaaaaaa
cacctgattttacgtgctcctcacccttctcctctttcctcataccgtggattttttggc
tcgaagcccttttcaaaaagcaatgaatatcttacatgtaacggcaaaaaaccgattaat
tggtgcttagcttga
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