Sulfurospirillum diekertiae JPD-1: SJPD1_0346
Help
Entry
SJPD1_0346 CDS
T05109
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
sulj
Sulfurospirillum diekertiae JPD-1
Pathway
sulj02020
Two-component system
sulj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sulj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SJPD1_0346
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SJPD1_0346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulj03021
]
SJPD1_0346
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sulj02035
]
SJPD1_0346
Transcription machinery [BR:
sulj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SJPD1_0346
Bacterial motility proteins [BR:
sulj02035
]
Flagellar system
Flagellar assembly proteins
Stator
SJPD1_0346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0122
Sigma70_r3
HTH_23
RPT
MarR
Sigma70_ECF
SpoIISA_toxin
FAM76
Motif
Other DBs
NCBI-ProteinID:
ATB68475
UniProt:
A0A290HAN0
LinkDB
All DBs
Position
320482..321195
Genome browser
AA seq
237 aa
AA seq
DB search
MNPTVKKQPNPYSQNLKKEQDELVLQYLPAVRAMAYRLRERLPASVDVNDLISIGTEEMI
KLSRRYDKDQNDSFWGYGKKRVYGSMLDFLRSLDTMSRANRRLIKMVDNEITAYLSEHGN
EPDDAYLAKALNEDIEKIAEARNSSMIVSVMSLNEQITILSGEDTAQKVEKDELMEMIQS
ILLTFGEREQMIIQLYYFEELNLKEISEVLDISESRISQIHKKLLAKIKEQLGINHG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctacagtaaaaaagcagcctaatccttacagtcaaaatcttaaaaaagagcaa
gacgaactcgttttgcaatatctcccagcagtgcgcgctatggcgtatcgtcttcgtgag
agacttcctgcttcggtagacgtcaacgatcttatttcgattggaacggaagagatgata
aaactctctcgccgttatgataaagaccaaaatgattctttttggggatatggtaaaaaa
cgtgtttatggttcgatgcttgattttttgcgctccttagatacaatgagcagagctaat
agacgtttaataaaaatggttgataacgagattactgcttacttgagtgagcatggaaat
gaacctgatgatgcttacttggcaaaagctttgaatgaagatatcgaaaaaattgctgaa
gcacgcaatagctcaatgatcgtttcagtgatgtctttaaatgagcaaattacaatttta
tcaggtgaagatactgcgcagaaagtcgaaaaagatgaactcatggagatgattcagagt
attcttttaacctttggtgaacgtgagcagatgattattcagctttattattttgaagag
cttaacctcaaagagatcagtgaagttttggatattagtgagtcgagaatttctcaaatt
cataaaaagcttttagcaaagatcaaagaacaattgggaattaaccatggctga
DBGET
integrated database retrieval system
