Sulfurospirillum diekertiae JPD-1: SJPD1_0717
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Entry
SJPD1_0717 CDS
T05109
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sulj
Sulfurospirillum diekertiae JPD-1
Pathway
sulj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sulj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SJPD1_0717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sulj03019
]
SJPD1_0717
03016 Transfer RNA biogenesis [BR:
sulj03016
]
SJPD1_0717
Enzymes [BR:
sulj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SJPD1_0717
Messenger RNA biogenesis [BR:
sulj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SJPD1_0717
Transfer RNA biogenesis [BR:
sulj03016
]
Prokaryotic type
tRNA degradation factors
SJPD1_0717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
PIN_8
Motif
Other DBs
NCBI-ProteinID:
ATB68832
UniProt:
A0A290HBA4
LinkDB
All DBs
Position
686192..688435
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AA seq
747 aa
AA seq
DB search
MEYKITVNNQEEIYDLGKVAKQAAGAALLKIKNTVILATVARDDSQVSENFVPLTVQYVE
KTYAVGKIPGGYFKRETKPGDFETLTSRIIDRSLRPLFPKGYAYPTQIVVFVLSCDPEVD
LQVAALNAASAALYLSDIPVNKAVAGVRIGYIDGKYVVNPSNSALKTSTLDLYVAGTKEE
LLMIEMRSIASMESMNLPIMAIDPMLDPTLAESVITKQSINEFNEDAILEAIDKAQSAIT
EATSAYEQTFAPLKKEDAELDYKEDLENDSIFAYIDEFYKQDVHNAINQMAKSERANELN
KIVTKILSDEVAVLEGWSKELVSSVINAYKKKIVREMIIDKHVRADGRKLNEIRPISIET
NILPLAHGSCLFTRGQTQALAVVTLGNDKDAQMYDLLTEKNTINDTFMVNYNFPGFSVGE
ASPLRSPGRRELGHGNLARRALEPVLDINRLQTIRLVSEILESNGSSSMATICGGVLALK
AAGINIEKLVAGIAMGLVFEGDKHAVLSDIMGLEDHDGDMDFKVAGTRDGITALQMDIKL
GGISRDVLKEALYQAKEGRAHILGLMEAASQEIVVNNSILPKLELFSVDPSKIVDIIGQA
GKTIREIIEKFEVSIDLDREKGEVKIAGENKEKVEAAKEHIIQITNKPSFGGRGGGRDRG
GDRHSAPREEKPVPTFVQDEVVDGVVKRIVDFGAFIELPGGIDGLLHVSKIADHRVDKVS
DYLALEQKVRVKILKQTGNKIELGLER
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
gtggaatataaaattaccgttaataatcaagaagagatttatgatcttggaaaagttgca
aaacaagcagcaggtgctgcattattgaaaattaaaaacactgttattttagcaacggtt
gcaagagatgacagccaagtttcagaaaattttgtaccattgaccgtacaatatgttgaa
aaaacatatgctgttggaaagattcctggtggttattttaaacgagaaacaaagcctggt
gattttgaaacacttacctcacgcattattgatcgaagtcttcgcccccttttccctaaa
ggatatgcttatccaacccaaattgttgtttttgtcttaagctgtgatcctgaagttgat
cttcaagtagctgcacttaatgctgctagtgcggcactctatctttctgatattcctgtc
aataaagcagttgcaggtgtacgaataggatatattgatggaaaatatgttgttaaccct
tctaattcggctttaaaaacaagcactttggatctttacgttgcaggtacaaaagaagaa
cttttgatgattgaaatgcgctctattgcatcaatggaaagcatgaatcttccaatcatg
gccattgatccaatgcttgatcctacattagcagaaagtgttattacaaagcaatcgatt
aatgaatttaatgaagatgcaattttagaagcaattgataaagctcaaagtgcgattact
gaggctacaagtgcgtatgagcaaacatttgcacctttgaaaaaagaagacgcagagctt
gattataaagaagatttagaaaatgattctatctttgcctatattgatgaattttataag
caagacgtgcataatgccatcaatcaaatggcaaaaagtgagcgagctaatgagcttaat
aaaattgtaactaaaattttaagtgatgaagttgccgttttagaaggatggagtaaagag
cttgttagcagtgtgattaatgcatataaaaagaaaatagtacgtgaaatgattattgat
aaacatgttcgtgcggatggtagaaaactcaatgaaataagacctattagtattgagacc
aatattttaccattggcgcatggatcatgtctttttacccgtggacaaacacaggcttta
gctgtcgtgacactgggtaacgataaagatgcacaaatgtatgatcttttgactgaaaaa
aatacaattaatgatacctttatggtgaattataattttcctggattctccgtgggtgaa
gcttctcctcttcgttcaccagggcgcagagagttaggacatggtaatcttgcacgccgt
gccttagagccggttcttgatataaaccgtctccaaacaattcgacttgtgtctgaaatt
ttggagtcaaatggttcgtcttcaatggcaaccatttgtggtggagtattagcacttaaa
gcggcagggattaatattgaaaaattagttgcaggtattgccatggggcttgtttttgaa
ggtgataaacatgcagttttaagtgatattatgggcttagaagaccatgatggtgatatg
gattttaaagtcgcaggaacaagagacggtataactgcgctacaaatggatattaaactc
ggtggtatttcacgtgatgtccttaaagaggcattataccaagccaaagagggaagagcg
catattttaggattaatggaagcagcaagtcaagagattgttgttaacaattctattttg
ccaaaacttgaacttttcagtgttgatccatcaaaaattgtggatattattggacaagca
ggtaaaactatccgagaaattattgagaagtttgaggtctctattgatcttgatcgagaa
aaaggtgaagttaaaatcgcaggtgaaaacaaagaaaaagttgaagctgcaaaagagcac
atcattcaaattaccaacaagccttcctttggtggacgtggtggtggaagagatagagga
ggggacagacacagtgcccctagagaagagaagccagttcctacatttgtgcaagatgaa
gtggtagatggtgttgtcaaacgtattgttgattttggtgcatttattgaactccctggt
ggcattgatggtctccttcatgtctctaaaattgctgatcaccgtgttgataaagtcagt
gattatctcgctttggagcaaaaagtacgtgtcaaaatcttgaagcaaacggggaataag
atcgagttagggctagagcgctaa
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