Sulfurospirillum diekertiae JPD-1: SJPD1_0780
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Entry
SJPD1_0780 CDS
T05109
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sulj
Sulfurospirillum diekertiae JPD-1
Pathway
sulj03030
DNA replication
sulj03430
Mismatch repair
sulj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sulj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SJPD1_0780
03430 Mismatch repair
SJPD1_0780
03440 Homologous recombination
SJPD1_0780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sulj03032
]
SJPD1_0780
03400 DNA repair and recombination proteins [BR:
sulj03400
]
SJPD1_0780
Enzymes [BR:
sulj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SJPD1_0780
DNA replication proteins [BR:
sulj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SJPD1_0780
DNA repair and recombination proteins [BR:
sulj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SJPD1_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ATB68894
UniProt:
A0A290HQJ3
LinkDB
All DBs
Position
746468..750013
Genome browser
AA seq
1181 aa
AA seq
DB search
MSDIPYTHLHLHTEYSLLDGANKIGKLVKKLKAQGVTSVAITDHGNMFGAIDFYKTMRKE
GIKPIIGMEAYIHNQEDISDKTTKQRFHLCLYAKNEVGYKNLMYLASMSYIKGFYYYPRI
NKKMLREHSEGLVCSGACLQGEVNWHLNLNNKRNVQFGARGYERAKEVALEYKDIFGEDF
YLEVMRHGITDQHFIDDDILRISKETGIKLIATNDTHYLEQDNAEAHEAFMCIAMNKEFD
DPNRLRHSVHEFYLKSPAQMSDLFADIPEAISNTQEIVEKCNLEIKLGDPTPPKFKFTKE
YAAKEGLSFESDDEFFAYHSRKGLEKRLLNVDVSKHEEYRARLEREIDIICKMKFPGYML
IVWDFIREAKERGVPVGPGRGSAAGSLVAFSLFITDIDPMPYNLLFERFLNPERISMPDI
DIDFCQSRRGEIIDYVVEKYGRYNVAQVITFGKLLAKGVIRDVARVLAIPYAEADAMAKL
IPDELGITLNGVGVEGEEGYKPGAFQKEPKLRELIESSPKMQRVWKFALALEGLNRNSGM
HAAGVVISDEELWHKTPLYQPSGEDHLVTQYSLNYLEDVDLIKFDFLGLKTLTVIDNALK
LIKLRYKKEIDFTIIDMNDPKVYELIQSGETVGLFQIESSGMQSLNERLKPTNFEDLIAV
LALYRPGPMESGMLDDFIERKNGLKEISYFFDEFTEPLRPILEPTYGVIVYQEQVMQIVQ
AIGGFSLGEADLIRRAMGKKKIDYMKQKAEEFAQGAVNQGLDRAHAIELFGLIEKFAGYG
FNKSHSAAYAMVTFETAYLKCYYPQEFMAALLTSEQDNTDKIVKYIDEVKRLGLKLLPPS
IQHSLIAFSAITDTDGQEAILFGMGAIKGVGNAAISKILEAREGALFADMSDFISRIDSS
KVNKKVLESFIKSGSFDDFGYSRRALLENIDSIIDASAECSRAKKMAEYSLFGDAEEMMT
VQVNIENIPEFDNKRMLELEKETIGFYISGHPLDAFRAEIDEMNYTLSSERDQVEDGSKA
LFIGKVEGITEKISKKGNKFGIISLMDFHGSMELTVFEKQLELLSRMDLEKPLCFKVDVS
NDGQNTKMRVMKIMELSDAKKEKIETKVIEVPQEPKVLLLDLSDDTSKLEFLYQIVRQNS
GRRPLHLVITSKLQDVVIETGFSVDDSIDEQIAALEYVKVI
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacataccgtacacccatttacatttacatactgaatattcacttcttgatggc
gccaataaaataggcaagctggtaaaaaaactcaaagctcaaggagtgacatccgttgcg
ataaccgatcatggaaatatgtttggcgcgattgatttttacaaaaccatgcgtaaagag
ggcattaagccgatcattggcatggaagcgtacattcacaaccaagaggatatcagcgat
aaaaccaccaaacaacgttttcacctctgcttgtatgccaaaaacgaagtagggtataaa
aacttgatgtatctggcttccatgagttacatcaaaggcttttactactatccgcgcatc
aacaaaaagatgttgcgtgagcactctgaggggctggtctgctcgggggcatgtttacaa
ggcgaagtgaactggcatctcaatctgaacaacaaacgtaatgtccaatttggtgcgcga
gggtatgaacgcgccaaagaagtggcactcgaatataaagatatttttggtgaggacttt
tacttagaggtaatgcgtcatggcattaccgatcaacatttcatcgacgatgatattttg
cgtatttccaaagagacgggcatcaagctcattgcgaccaatgacactcactacttagaa
caagacaatgccgaagcacacgaggcatttatgtgtattgcgatgaataaagagtttgac
gatcctaatcgtcttcgtcactccgtgcatgagttttacctcaaatcccctgcgcaaatg
agcgatctttttgcggatatccctgaagccatttccaatacccaagagattgtggagaag
tgtaatttagagattaaactgggcgatccaacccctccaaagtttaaatttaccaaagag
tatgccgccaaagaggggcttagctttgagagcgatgacgagttttttgcgtaccacagt
cgtaaaggactcgaaaagcgtcttttaaatgttgatgtcagtaagcatgaagagtatcgc
gccagactggaacgggaaattgacattatctgcaagatgaaattccctggttatatgctc
atcgtttgggattttatccgtgaagccaaagagcgcggtgttcctgtgggaccaggccgt
ggttcagcagcaggtagtttggtcgcgttttcgctttttatcactgacattgacccgatg
ccctataacctgctcttcgagaggttcttgaatcctgaacgtattagtatgcccgatatt
gatattgacttttgccagagtcgtcgtggtgaaatcattgattacgttgttgaaaaatac
ggacgctacaacgtcgcgcaagtcattacctttggtaaacttttagccaaaggtgtcatt
cgtgatgttgcgcgcgttctcgccattccttatgccgaagccgatgcaatggcaaaactg
atccccgatgaactgggcatcacacttaatggtgtgggtgttgagggagaagaagggtac
aaaccaggcgcctttcaaaaagagccaaaacttcgtgaactcattgaaagcagccctaag
atgcaacgcgtgtggaagtttgcgttagcacttgaaggactgaaccgcaactctggtatg
catgccgcaggtgtggtcatcagcgatgaagagttatggcataaaacaccgctctatcag
ccttctggcgaagatcatctcgtcacacagtattcactcaattaccttgaagatgttgac
ttaatcaagttcgactttttgggtctgaagaccctgaccgtcattgataatgcgcttaag
cttattaaacttcgttacaaaaaagagattgattttacgatcattgatatgaacgatcct
aaggtgtatgaactgattcaaagtggcgaaacagtgggactgtttcagattgagtccagt
ggtatgcaatctttgaatgagcgtctcaaaccaaccaactttgaagatcttattgccgta
cttgccctttatcgcccaggcccaatggaatcaggtatgttggatgactttatcgaacga
aagaatgggctaaaagagattagttacttctttgatgaatttaccgaaccccttcgtcct
attttagagccaacgtatggcgttattgtctatcaagaacaggttatgcagatcgttcaa
gccattggtggttttagccttggcgaagcggatttgattcgtcgtgcgatgggtaagaaa
aagatcgactacatgaaacaaaaagccgaagagttcgcgcaaggtgccgttaatcaaggc
ttagatcgcgcccatgcgattgagctttttggcttgattgagaagtttgcgggatacggt
tttaacaaatcgcactctgcggcctacgcgatggttacctttgaaacggcgtatctgaaa
tgctactatccgcaagagtttatggcggcacttctcacatcagagcaagacaataccgat
aaaatcgttaaatacatcgatgaggtcaaacgtcttggattgaagcttttaccgccatct
attcagcacagtttgattgcatttagtgcgattactgacacagatggtcaagaggcaatt
ctctttggtatgggtgcgatcaaaggggttggaaatgcggcgatcagtaaaatcttagaa
gccagagagggcgcactctttgcagatatgagcgattttatctcccgtattgacagctct
aaggtcaataaaaaagtattagagtcttttatcaaatcaggaagttttgatgactttggc
tactcaagacgcgctttgcttgaaaatattgatagcattattgatgcaagtgctgagtgc
agtcgggcgaagaagatggcagagtattccctctttggcgatgctgaagagatgatgacg
gtacaagtaaacatcgaaaatattcccgaatttgataataagcgcatgttagagcttgaa
aaagagacgataggtttttatatttcaggtcatccattagatgcatttagagcggaaatt
gatgaaatgaattacaccctttccagcgagcgtgatcaggttgaagatggcagtaaggca
ctttttattggaaaagtggaaggcatcaccgagaaaattagcaaaaaaggcaacaagttt
ggcattatctccttgatggattttcacggttctatggaactgactgtctttgaaaaacag
ctggaattgctctcccgaatggatttggaaaaaccactctgctttaaagtcgatgtgagc
aatgatgggcaaaataccaaaatgcgcgttatgaaaattatggagcttagtgacgcgaaa
aaagagaagattgaaaccaaagtcattgaagtgccccaagagcccaaagtgcttctcctt
gatctcagtgatgacacgagcaaactggaatttttataccaaattgtgcgtcaaaattct
ggacgtagacctcttcatctcgtcatcacgtcaaaactgcaagatgtcgtgatcgaaact
ggctttagtgtggatgatagtattgatgaacagatcgcagcactcgagtatgtcaaggtc
atttag
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