Sulfurospirillum diekertiae JPD-1: SJPD1_0921
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Entry
SJPD1_0921 CDS
T05109
Name
(GenBank) putative cyclic di-GMP phosphodiesterase
Organism
sulj
Sulfurospirillum diekertiae JPD-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
Response_reg
PAS_9
HD_5
PAS
HD
PAS_4
PAS_8
VpsR
PDE8A_N
Gtr1_RagA
FleQ
Motif
Other DBs
NCBI-ProteinID:
ATB69034
UniProt:
A0A290HQX0
LinkDB
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Position
complement(894692..896896)
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AA seq
734 aa
AA seq
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MTIDLKSIPTEANVGSILIIDHSRMFSKMLQKELKTLGYTIRHANTLHAAIELLTFLSFD
LIVLDLTLPDGEGELILQNLHIFEKHKILVYTSDATTKQCDEWAHYGVLGYLCKTSPLSF
VGQEIERTMKALLKNTTNSILVIDDSPTSAQHIQELLEPLNYHVEIAYDSPSAQELLNST
PFDLIILDFSSSNAMGEAFLVEFRSMPQSMHIPIFILTEQYNAHTVRKLIKQGANEFFHK
PFIEEELLQKVDYWIDFGRKTKENFYQKTILQEYKNAVDRSTIVSKTNKEGIITYANDKF
CKISGYRYEELIGQPHSIVRHPSVPKETFKQMWDTLLKGEKWEGVVKNRRKDGTAYWVNA
VINPIVDHNGNIIEFISIRTDISNVREIHDSLQNQLKISEKNFEDAYHMSKQYENAINKS
TILTRTDLDGNITFANENFYKTTGFKEAEVIGKNHNITRHNDTPNEVFIDLWDTLKKGKV
WKGVLKNQKKNGQAYWVYSTILPIFNKNNTPLEYMAIRRDVSEIITLHVELEATQQEVIY
CMGEIAESRSKETGNHVRRVAAYSHLLAQKYGLDKKESDLIASASPMHDIGKVGIPDAIL
HKPGSLSDEEWTVMRTHSMIGYTILQNSTRPLLKAAATIAKEHHEKYDGSGYPMNLKGTE
IHLYARIVSVADVFDALSHDRCYKKAWEDAAIFEFFENERGKHFDPQIVDLFLNAKEDFL
AIRDSLKDALTYAI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgacaattgatctaaaatcaattccaacggaagccaatgttggctcaattcttatcatt
gatcattcacgaatgttttcaaaaatgcttcaaaaagaactcaaaactttgggttataca
atacgacatgcgaacacgttacacgcagcgatagaacttctcacttttttatcctttgac
ttgattgttttagatctcacacttcctgatggtgaaggggagcttattttacaaaatctt
catatttttgaaaaacataagattcttgtttatacgtccgatgctacaaccaaacaatgt
gatgagtgggcgcattatggtgttttaggctatttgtgtaaaacttcccccctttcattt
gtgggtcaagagattgaaagaaccatgaaagcccttttaaaaaatacaaccaactccatt
ttagtcattgacgattcacctacaagtgcacagcatattcaagaacttttagaaccgtta
aactatcacgtagagattgcatatgatagtcccagtgcgcaagaactcctcaacagcaca
ccctttgatcttataatccttgatttttcctcttcaaacgctatgggtgaagcctttttg
gtagagtttcgatctatgccccaaagtatgcacatccctatttttattcttacagaacag
tacaatgcgcatacggtgagaaagcttattaaacaaggtgctaatgagttttttcataag
ccttttattgaagaagagcttttacaaaaagtcgattattggattgattttgggcgaaaa
accaaagaaaatttctatcaaaaaacgattttacaagagtataaaaatgcggttgatcgc
agtacgattgtctcaaagaccaataaagaaggcatcatcacctacgccaatgataaattt
tgtaaaatctcaggctatcgttatgaagagctgataggacaaccgcatagcattgtgcgt
cacccaagtgtgcccaaagagacgtttaaacagatgtgggacacccttttaaaaggtgaa
aagtgggaaggtgtggtcaaaaatagacgcaaagatggtacagcatattgggtcaatgcg
gtgattaatcccattgttgaccacaatggcaacattattgaattcatcagcattcgaacc
gatattagcaatgtgcgtgaaattcatgactctcttcaaaatcaacttaaaatttctgaa
aagaactttgaagatgcgtaccatatgtccaaacaatatgaaaatgccatcaataaaagt
actatcctgacgcgtacggatttggatggtaacatcacctttgccaatgaaaatttctat
aaaacaaccggttttaaagaagcagaagtcattgggaaaaatcacaacattacccgccat
aacgatacccctaacgaagtttttattgatttatgggatacgcttaaaaaaggcaaagtc
tggaaaggcgttttgaaaaatcagaagaaaaatggtcaagcgtattgggtttattcaacg
atattaccgattttcaacaagaacaatacccctttagaatacatggcaatacggcgtgat
gtcagcgaaatcattaccttacatgtagagcttgaagcaacgcaacaagaggttatttac
tgcatgggcgagattgcagaaagccgcagtaaagagacaggcaatcatgtcaggcgtgtc
gcggcctattctcacctattagctcaaaaatacggtcttgataaaaaagaatccgacctc
atcgcatcagcttcacctatgcacgatataggaaaagtggggattcccgatgctatttta
cataaaccaggttctttaagcgacgaagagtggacggttatgcgtacacactcgatgatt
ggctacaccattttacaaaactctacgcgaccactccttaaagcagccgcgaccattgct
aaagagcaccatgaaaaatacgatggttcaggttatcccatgaatcttaaaggcacagag
attcatctctatgcacgcattgtgagtgttgccgatgtttttgatgctctgagccatgac
cgttgttataaaaaagcatgggaagatgcggctatttttgaattttttgaaaatgagcgt
ggaaaacattttgacccgcaaattgttgatcttttcctgaatgctaaagaggatttttta
gccatccgcgatagtcttaaagatgctcttacctatgctatctaa
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