Sulfurospirillum diekertiae JPD-1: SJPD1_0971
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Entry
SJPD1_0971 CDS
T05109
Name
(GenBank) putative nuclease, SbcC-like
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sulj
Sulfurospirillum diekertiae JPD-1
Brite
KEGG Orthology (KO) [BR:
sulj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulj03400
]
SJPD1_0971
DNA repair and recombination proteins [BR:
sulj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SJPD1_0971
Archaeal homologous recombinant proteins
SJPD1_0971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_29
SbcC_Walker_B
ABC_tran
DUF6647
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ATB69083
UniProt:
A0A290HC05
LinkDB
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Position
933728..936097
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AA seq
789 aa
AA seq
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MILSKLHLENFKRYTSFDIEFGEGLIGIIGKNGSGKSTLFEAILFALYGELRNKKFKEVI
RNASASDKDAVVVELDFEFEGMAYKVMREFRGKALSANAKLYKNGELTTSGAREVTIAIT
KLTKMSKDAFLHTLFASQKELTSLSTLNKEDRKKMIRRLLGLEKIDFVENELIEKSRELK
RDITASAEFLLGEEELKSKTALIKEITAIKQAFEKEVTTKTLELETTKKQELHVKQELEL
FVKTKEQKQKLINELSLIKNDINTNIANQTKLTTELKNLETKAKELKSLSTVKKEYESLH
VKLKEHETLKNIQIKKEGLEKEQIQLRAQYTKAKADIATLEEQTKPYETLLGQKKEHEAL
HVKLKTELTGKQTEQKNLQNELSAEQRVVLDTQQKITKIQSLGRESNCPTCTRQLLDEYD
NVIASLNDIVQKTQSQKIDKTKEKLELLTKQIGELELQKEQTQKALHVNETALSLILSKQ
KDLASAKEHFTKVNEQGKRNKDELNKLAQHAYDEALHVSLQKSFLELKPKFETVLSLEAE
LKREQGVREDLALTCKSAEALQGSAKEKELEVSKTLYDEPKHTAKQSEYDELQKQKEKQY
SVISELKEKIAKNEGEIKTLQNALENNEVQLKKVQSKKDDLSDYEKIKVSLSEFKTKLNS
KIAPRISQIASQMYATITKGKYQYIEVNNDFDFFIYDEGKCYPIERFSGGEIDLANLVLR
IAISKTLSELSGASSVGFLAFDEVFGSQDENRRMQILEAFHTIKEQYRQIFLISHEMEIK
EMFERVVEL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatactctctaaactccaccttgaaaacttcaaacgctacacctcctttgatattgag
tttggcgaggggcttatcggtatcatcgggaaaaatggcagtggcaaatcgacccttttt
gaagccattctttttgccttatacggcgagcttagaaataaaaaatttaaagaagtcata
cgaaacgctagtgctagtgataaagatgctgttgtggtggagcttgattttgagtttgaa
ggtatggcgtacaaagttatgcgtgagtttcgaggaaaagccctcagtgccaatgccaaa
ctgtataaaaatggtgagctgactaccagtggagcgagagaagtcaccatagctatcaca
aaactcacaaagatgagcaaagatgcttttttacatacccttttcgcttctcaaaaggag
ctgaccagcctcagcacgcttaacaaggaagatcgaaaaaagatgatacgccgtcttttg
gggcttgaaaagatagactttgtggaaaatgaactcatcgaaaaaagcagagaactcaaa
cgcgacatcaccgcttcggctgagtttctcttaggcgaggaagagctcaaaagcaaaaca
gctctcataaaagaaattactgccataaaacaagcgtttgaaaaagaggtcacaaccaaa
accttagagctagaaaccaccaaaaaacaagagttacatgtaaagcaagaacttgaactt
tttgtcaaaacaaaagagcaaaaacaaaagctcatcaacgaactttccctcatcaaaaat
gacatcaatacaaacattgccaaccaaacaaaactcaccacagagcttaaaaacttagaa
acaaaagccaaagaacttaaaagtttaagcactgtcaaaaaagagtacgaatctttacat
gtaaagttaaaagagcatgaaactctcaaaaatatacagatcaaaaaagagggcttagaa
aaagagcaaatccagttacgtgcccaatacaccaaagccaaagcagatatcgcaactttg
gaagagcaaaccaaaccgtatgagacacttttagggcaaaaaaaagagcatgaagcttta
catgtaaagctaaaaaccgaacttacaggcaagcaaactgagcaaaaaaatcttcaaaat
gaactctcagcagaacagcgagtggttttagacacacaacaaaaaataaccaagatacaa
agcttaggtcgagaatcaaactgcccaacctgtacaaggcaattgctcgatgagtacgac
aatgtcatcgcatccctcaacgacatcgtgcaaaagacgcaaagccaaaagatagacaaa
accaaagaaaaacttgaactcctcaccaaacagataggagagcttgaacttcaaaaagaa
caaacccaaaaagctttacatgtaaacgaaacggcgctaagtttgatactaagcaagcaa
aaagatttggcaagtgccaaagagcattttacgaaagtaaacgaacaaggcaaacgcaac
aaagatgagctaaataaactcgcacaacacgcttacgatgaagccttacatgtaagccta
caaaaaagctttttggagctaaaaccaaagttcgaaaccgtcctaagtcttgaagcagaa
ctcaaacgagagcagggcgttcgcgaggatttggcacttacatgtaagagtgcagaagct
ttacaagggagcgcaaaagagaaagaactagaagtttcaaaaacactgtacgatgagcca
aaacacaccgcaaaacaaagcgaatacgacgaactgcaaaagcaaaaagagaaacaatac
agcgttatttcagagctaaaagagaagatagccaaaaatgagggcgagataaaaaccttg
caaaatgctctggaaaataacgaagtccaacttaaaaaagtacagagtaaaaaagacgat
ttgagtgattatgaaaagataaaagtaagccttagcgagtttaaaacaaaactcaactca
aaaatagccccacgcatctcgcaaattgcctcccagatgtacgccaccatcaccaaaggc
aaataccaatacatcgaagtgaacaacgactttgattttttcatctacgacgagggcaaa
tgctaccccattgaacgcttcagcggcggcgagatagaccttgccaacttagtgcttcgc
atcgccatctccaaaacactgagtgaactcagcggtgcaagtagtgtgggatttttagcc
ttcgatgaagtctttggaagccaagacgaaaaccgaagaatgcaaatcctagaagcgttt
cataccataaaagaacagtatagacagatatttttgataagtcacgagatggagataaaa
gagatgtttgagagagttgtggagttgtga
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