Sulfurospirillum diekertiae JPD-1: SJPD1_1899
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Entry
SJPD1_1899 CDS
T05109
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sulj
Sulfurospirillum diekertiae JPD-1
Pathway
sulj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sulj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SJPD1_1899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulj03400
]
SJPD1_1899
Enzymes [BR:
sulj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SJPD1_1899
DNA repair and recombination proteins [BR:
sulj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SJPD1_1899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ATB70004
UniProt:
A0A290HTP6
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Position
1839483..1840247
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AA seq
254 aa
AA seq
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MKLVSWNVNGIRAVASKNAFAWVDVFKPDILCLQEIKAEAHQIPEPLFAHAFTCKYVNAA
TKKGYSGTMSFSTIDFKKTDTAHAIDHTHEGRILEHHFGDVVLFNVYFPNGQQSEERLAH
KMKFYSDFLAHTETLRAEGNSIIICGDVNTAHRSIDLKNPKANEETSGFLPIERAWIDSL
LAHGYIDTFRHIHGDIKDAYSWWSYRFGARERNVGWRIDYVFISKELEPRLKDAFILASV
EGSDHCPVGIELEL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtttcgtggaacgtcaatggcattcgcgctgtggcttctaaaaatgcgttt
gcatgggtggatgtgttcaaacctgacatcttgtgtttacaagagatcaaagccgaagcg
catcaaattcctgaaccactttttgcgcatgcttttacatgtaaatatgtcaacgctgct
acgaaaaagggctattcggggacgatgagtttttcgaccattgactttaaaaagaccgac
accgcacacgctatcgaccatacgcacgaagggcgcattttggagcaccattttggcgat
gtggttttgtttaacgtttactttcccaacggtcaacaaagcgaagagcgactggcgcat
aagatgaaattttacagtgattttttagcacacaccgaaacgcttagagcggagggaaat
agcattatcatctgtggcgatgtcaacacggcgcaccgttctattgatcttaaaaaccct
aaagccaatgaagagacttcagggtttttgcccattgagcgcgcgtggatcgactcgctt
ttagcacacggctacatcgacacctttaggcacattcatggtgacatcaaagatgcgtac
tcgtggtggtcgtaccgttttggagcgagagaacgtaatgtcggatggagaatcgactat
gttttcatctccaaagagctcgaaccgcgtttgaaagatgcgttcattctagcctctgtt
gaaggctcagaccattgtcccgtaggcattgagctagagttataa
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