Sulfurospirillum diekertiae JPD-1: SJPD1_2019
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Entry
SJPD1_2019 CDS
T05109
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sulj
Sulfurospirillum diekertiae JPD-1
Brite
KEGG Orthology (KO) [BR:
sulj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sulj03016
]
SJPD1_2019
Enzymes [BR:
sulj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SJPD1_2019
Transfer RNA biogenesis [BR:
sulj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SJPD1_2019
Prokaryotic type
SJPD1_2019
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
ATB70124
UniProt:
A0A290HU24
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All DBs
Position
complement(1955259..1956086)
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AA seq
275 aa
AA seq
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MDNRLFVAYKPSGMVSNHFLSRIKRRYTVKKAGFSGTLDPFAQGILIIAFGQFTKLFRFL
KKAPKTYRATLWIGASSPTLDIEKIEKVEQMMPFHPDSVNFILKSMMGEITYLPPKYSAK
KVEGARAYDLARADKDFELKAITSTVYDCHLIHYAHPFLTFEVTLSEGGYVRSIGALIAQ
KLGFSGSLSALERLNEGAFIYENEKELNPLEYLDLPLNHYLGDPHDILLGRKLSAQNFEK
QEEGIYQIVIDEVLSVVEISANGVEYLLNSLSLKA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtggataaccgcctttttgttgcctataagccttcaggtatggtttcaaaccatttttta
agccgcattaaacgacgttacactgttaaaaaagcaggattttcaggcacgcttgaccct
tttgctcagggcattttgattattgcctttgggcagtttacaaaattgttccgttttttg
aaaaaagcgccaaaaacgtaccgcgcaacactttggataggtgcatcaagcccaacactc
gatatcgaaaagattgaaaaagtcgaacagatgatgccgtttcatcccgattctgtcaac
ttcattcttaaaagcatgatgggcgaaataacctatttacctccaaaatattcagctaaa
aaagttgaaggggcaagagcgtatgatttggcacgtgccgataaagactttgagcttaaa
gccattaccagcaccgtttatgactgtcatttaatccactatgcccatccttttttgact
tttgaagtgactctttctgaaggtggatatgttcgtagtattggggcattaattgcacaa
aaacttggtttttctggctctttgagtgcattggaacggctcaatgaaggtgctttcatc
tatgaaaatgagaaagagctcaatccacttgagtatcttgatctgcctttgaaccattat
cttggagatcctcacgatattttacttgggcgaaagctcagtgcccaaaattttgaaaaa
caagaagagggtatttatcaaattgtgattgatgaagtccttagcgttgtggaaatcagc
gcaaatggggtagaatatctcttaaattcactatcgctaaaggcgtaa
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