Sulfurospirillum diekertiae JPD-1: SJPD1_2634
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Entry
SJPD1_2634 CDS
T05109
Name
(GenBank) biotin carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
sulj
Sulfurospirillum diekertiae JPD-1
Pathway
sulj00220
Arginine biosynthesis
sulj00791
Atrazine degradation
sulj01100
Metabolic pathways
sulj01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sulj00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
SJPD1_2634
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
SJPD1_2634
Enzymes [BR:
sulj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
SJPD1_2634
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
DUF2118
ATP-grasp
ATPgrasp_Ter
Biotin_lipoyl_2
GCV_H
ATP-grasp_3
RimK
NQRA_N
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ATB70728
UniProt:
A0A290HSN7
LinkDB
All DBs
Position
complement(2541826..2545434)
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AA seq
1202 aa
AA seq
DB search
MFSKILIANRGEIACRIIRTLKKMGIASVALYTKADEDSLHVSLADEAYCIGEGLASESY
LNTQKIFDVVCKSGAEAIHPGYGFLSENAAFAKACEEKGIVFIGPRAEHMEAFGLKHTAR
SLAEANNVPLLPGSSLLFDLAEAITEAKRIGYPVMLKSTAGGGGIGMQLCYDEQALCDAY
ASVKRLSENNFSNGGMFLEKYVEHARHIEVQVFGDGKGYVATLGERDCSVQRRNQKVIEE
TPAPFLHVKTREALLSAARALCESVKYLSAGTVEFVYDTQSEQFYFLEVNTRLQVEHGVT
EEVSGIDLVQWMVNQAYGHNPELYDYTHAPKGHSIQVRVYAEDPMKNFQPSSGVLTHVHF
APSIRVDSFIETGLNVSSFYDPMIAKLIVKENTREEALVKMAQAIQETRIDGIETNIDYL
GAIVEGEVFQAGKQTTKFLNHFRFAPQSIDVLRPGTHTTIQDYPGRIGYWDIGVPPSGPF
DNLSFRYANALVGNSEDAAGFEIAIAGPTLRFNYEGVIALCGAVIDAFLDGIKVGMNQAL
HVKAGSVLKLKKVHTKGFRTYLAVRGGIDVPLYLGSRSTFSLGLFGGHAGRALLAGDVLH
VDAMVAKDAHFEAMTPYRAFGNEWRIGVLYGPHGAPDFFTDEDIKAFFEACWEVHYNSNR
TGVRLIGPKPSWARSDGGEAGLHPSNIHDTAYAIGAVDFTGDMPVILGPDGPSLGGFVCP
VTIVSAELWKIGQLRARDTITFVPICHDEAMQMLRLQEEAIASLSTYDERSMLHEKEIGS
PILYHDESSVLLPSVTFRQSGDSNLLIEYGEMQLDISLRFRIHVLMQAVMDANIKGVIEL
TPGIRSLQIHFNPRLCNREALMQTVQRLELSLPSIEDIEVPARIVHLPLSWDDEQTRIAI
DKYMKIVRPDAPWCPSNIEFIRRINGLESIDEVKRILFEASYLVMGLGDVYLGAPVATPL
DPRHRLVTTKYNPARTWTPENAVGIGGAYMCVYGMEGPGGYQFVGRTVQMWNRHRQTEDF
TEGKPWLLRFFDQIRFYEVSAEELLRLREDFPRGRAKLRIEETTFSLKKYQAFLEENEST
IKAFKATQQNAFEEERTMWERTGLANFTSQSAHEEHHDESASVVIDDDKEAVEAPIQGNL
WKILAKVGDHVKEGEALAIVESMKMEVEIESPEDGVIVDILCEEGESIYAGKQLFILEPL
KG
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaaaatactgatcgccaaccgaggcgaaattgcgtgtcgtatcatacgcacg
ctcaaaaagatgggcattgcttctgttgccctgtacaccaaagccgatgaagattcttta
catgtaagcttagccgatgaggcgtattgtattggtgaaggcttagccagcgagagttac
cttaacacccaaaaaatttttgatgtggtttgtaaaagtggcgcggaggcaattcatccg
gggtatggatttttaagtgaaaatgccgcgtttgccaaagcgtgtgaagaaaagggcatt
gtgtttattggtccgcgggctgaacatatggaagcttttggactgaaacatactgcacgt
tctcttgcagaagctaacaatgttcctcttcttcccggctcttcactgctttttgatttg
gcagaagcgatcacagaagccaaacgtattgggtatcctgtaatgctcaaaagtaccgca
ggcggtggcggcatcgggatgcagttgtgttatgacgaacaagccctttgtgatgcgtat
gcttcggtcaaacgcctcagtgaaaacaacttctccaatggcggaatgttcttagaaaaa
tacgttgaacatgcgcgtcatatcgaagtgcaagtctttggtgatggcaaaggctacgtg
gcaacgcttggggagcgagactgttcggtgcaacgccgtaatcaaaaagtcatcgaagaa
acgcccgctccttttttacatgtaaagacacgcgaagcgcttttgagtgcagcgcgtgct
ttgtgtgagtcggtcaagtacctctccgctgggacggttgaatttgtctacgatacgcaa
agtgaacagttttacttcctagaggttaacacccgtttgcaagtcgaacacggtgtcacc
gaagaggtcagcggcatcgacttggtgcagtggatggtgaatcaagcctacgggcataat
cccgaattgtacgactatacgcatgcaccaaaagggcactctattcaggtgcgcgtgtat
gccgaagatccgatgaaaaattttcaacccagctccggtgtgctcacccatgtgcatttt
gcccccagcattcgcgtggatagttttattgaaacgggtttgaatgtttcatccttttac
gacccgatgattgcaaagctgattgtgaaagaaaatacgcgcgaagaggcgttagtcaaa
atggcgcaggcaattcaagagacacgcattgatgggattgaaaccaatatagactacctt
ggtgcgattgtcgaaggtgaggtttttcaagcagggaagcaaaccactaagtttttgaat
cactttcgttttgcgcctcagagtattgatgtattacgtccgggaacccatacaacgata
caagattatccgggaagaatcggatattgggacattggcgtgccgcccagtggtccattt
gataatctcagttttcgctatgccaatgcccttgtgggcaatagtgaagatgccgcagga
tttgagattgccattgcggggcctacgcttcggtttaattacgaaggggtgattgcgttg
tgtggtgcggtgattgatgcttttttagatggcattaaagtggggatgaaccaagcgtta
catgtaaaagctgggagtgttttaaaacttaaaaaagtgcacactaaaggctttcgaacc
taccttgccgttcgagggggcattgatgtacctttgtatcttggcagccgttctaccttt
tcacttggtctttttggagggcatgcgggaagagctttgcttgcaggagacgttttgcat
gtcgatgcaatggttgccaaggatgcccattttgaagccatgacaccttatagagcgttt
ggaaatgagtggcgcattggggtgttgtatggaccgcatggcgcacctgatttttttacg
gatgaagatatcaaagcctttttcgaagcatgttgggaagtgcattataactccaatcgc
acgggagtgagactcataggccctaaaccttcatgggcgcgcagtgatgggggagaagca
gggttgcatccgtctaatattcacgataccgcctatgccataggtgcagtggattttacg
ggtgatatgcccgtcattttagggcctgatggaccaagtttaggcggttttgtctgtcct
gtgacgattgtgagtgcagagctttggaagataggacagttgcgcgcgagagacaccatc
acgtttgtgcctatctgccatgatgaagcgatgcaaatgcttcggttgcaagaggaggcg
atagcctctctttccacatacgatgaacgctcaatgctccacgaaaaagaaataggctcg
cctattttgtatcacgatgagagtagtgtgcttttaccgagcgtgacctttcgccaatca
ggagatagtaacttactgatcgaatacggtgaaatgcaactcgatattagcttgcgtttt
cgtatacatgtgctgatgcaagccgttatggatgccaatattaagggtgtgattgaatta
accccggggattcgttccttgcaaattcattttaatccacggctgtgcaaccgtgaggca
ttgatgcaaacggtacaacgcttagagctctctttaccgtcgattgaagatattgaagtg
cctgcgcgcattgtgcatttaccgctttcatgggatgatgaacaaacacgcattgcgatt
gataagtatatgaaaatcgttcgacctgacgctccgtggtgtccgagcaatatagaattt
atccgtcgtatcaacggtttagagagcattgatgaggtgaagcgcattttgtttgaagcg
agctatttggttatggggctgggcgatgtttatctgggcgctcctgtggcgacaccgctt
gatccaaggcaccgcttggtcacgactaaatacaatcccgcccgaacatggacacctgaa
aatgcggtgggcattggtggggcatacatgtgcgtgtacggcatggaagggccgggaggt
tatcagtttgtagggcgcacggttcaaatgtggaatcgccaccgtcaaaccgaagatttt
acagaaggcaaaccttggttattgcgcttttttgaccaaatccgtttttacgaagtgagt
gcggaagagttactgcgtttgcgtgaggatttcccacgaggacgcgctaagctgcgcatt
gaagagacgacgtttagccttaaaaaataccaagcatttttagaagaaaatgagagcacg
attaaagcttttaaagccacgcaacaaaacgcatttgaagaagaacgcaccatgtgggag
cgcacgggtcttgccaattttacctcacaaagcgcacacgaagagcaccacgatgagagt
gcttctgtggtgattgatgacgataaagaagccgttgaagctccaattcaaggcaatcta
tggaagattttagccaaagtgggcgatcacgtcaaagagggtgaagctttagccatcgtc
gagtcgatgaagatggaagtcgaaatcgaatcgccagaagatggcgtgattgtcgacatt
ttgtgcgaagagggtgagagtatttatgcaggcaaacaacttttcattttagagccttta
aaagggtaa
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