KEGG   Sulfolobus sp. S-194: EWF20_02060
Entry
EWF20_02060       CDS       T07725                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sull  Sulfolobus sp. S-194
Pathway
sull03030  DNA replication
sull03410  Base excision repair
sull03420  Nucleotide excision repair
sull03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sull00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EWF20_02060
   03410 Base excision repair
    EWF20_02060
   03420 Nucleotide excision repair
    EWF20_02060
   03430 Mismatch repair
    EWF20_02060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sull03032]
    EWF20_02060
   03400 DNA repair and recombination proteins [BR:sull03400]
    EWF20_02060
Enzymes [BR:sull01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     EWF20_02060
    6.5.1.6  DNA ligase (ATP or NAD+)
     EWF20_02060
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     EWF20_02060
DNA replication proteins [BR:sull03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    EWF20_02060
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     EWF20_02060
DNA repair and recombination proteins [BR:sull03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     EWF20_02060
   NER (nucleotide excision repair)
    Other NER factors
     EWF20_02060
   MMR (mismatch excision repair)
    Other MMR factors
     EWF20_02060
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-ProteinID: QIW23060
UniProt: A0A9X7THF2
LinkDB
Position
complement(459825..461627)
AA seq 600 aa
MEFKLIAEYFDKLEKISSRLQLTALLTDLFKKADKNVIDKVVYLIQGKLWPDFLGYPELG
VGEKLLIKAISIAVNVKEEVVEEQLKVVGDLGEVAMRLKKTPQSASILSFLGAQANEGLT
VEETYDSLTKIALASGEGSRDIKIRSLAGLLKKASPLEAKYIVRFVDGRLRVGIGDATIM
DALSTAFTGSTSFRPLIERAYNLRADLGNIAKIIAQQGVEALKDIKPQVGIPIRPMLAER
MNDAAEILAKVGGEALVDYKYDGERAQIHKKDREVFIFSRRLENITRMYPDVVEYVKEYI
NANEVIIEGEIVAVDPESNEIRPFQELMHRKRKNDINEAIKEYPVNVYLFDLMYYEDVDY
TMKPLPERRKKLEEVIKPNDKLHIAHHIYTNNVDKLMEFFYDAISNGAEGVMVKSVAKDS
IYQAGSRGFLWIKLKRDYQSEMADTVDLVVVGAFYGRGKRGGKLSSLLMAAYDPETDTFK
TVCKVASGFSDAELDELQKKLMEIKLDKKDPRVDSQLEPDIWVEPKYVAEIIGAEITLSP
EHTCCKDMVSKGAGLSVRFPRFIRWRDDKSIEDATTPKEIYEMYKMKLRKKEEEQRIDET
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggagtttaaactcatagctgaatactttgataaacttgagaagatatcttcaaggctt
caacttaccgcattattaactgatctgtttaaaaaagctgataaaaatgtcattgacaag
gtagtttatttaattcagggtaaattatggccagactttttaggctatccagagctagga
gttggtgaaaaattacttattaaagcaatttcaattgctgtgaacgttaaagaggaagta
gtagaagagcaattaaaagtagttggtgacttaggagaagttgcaatgagacttaagaaa
actcctcagtctgcctcaattttaagctttttaggtgctcaggcaaatgagggtttaact
gttgaagaaacttatgattctttgactaaaatagcactagcttcaggcgagggtagtagg
gatattaaaattagatctttagctgggttactaaagaaggcttctcctttagaagcaaaa
tatatagttaggttcgtagatggaagattaagagtcggaatcggcgatgccacaataatg
gatgcactatcaacagcatttactgggagtacctcatttagaccattaatagaaagagcg
tataacttacgcgctgacttaggtaatatcgcaaaaattattgcgcaacaaggtgtggaa
gctttaaaggacattaaacctcaagtaggaattcctataaggccgatgttagctgaaaga
atgaacgatgctgcagaaattttagctaaagtaggcggtgaagctttagtagattacaaa
tatgacggggaacgtgctcaaatacataaaaaagatagagaagtatttatattttcaagg
agattagagaatattactagaatgtatcctgatgttgtggaatatgtgaaagaatacata
aacgctaatgaagttataattgaaggggagatagtagctgtagacccagaaagtaacgag
atcagaccgttccaagagttaatgcataggaaaagaaagaatgatataaatgaagctata
aaggaataccccgtaaacgtttatcttttcgatttaatgtattatgaagatgtagattat
actatgaagcctttgccagaaagaaggaagaaattagaagaagttattaaaccaaatgat
aaattacatatagcccatcatatttatacaaataatgtagataagttgatggaattcttt
tatgatgctataagcaatggtgcagaaggtgtaatggtaaaatcggttgctaaagattct
atatatcaagcaggttctagaggtttcttatggattaaactaaagagggattatcaaagc
gagatggctgatacagttgacttagtagtggtaggagcattttatgggagaggaaaaaga
ggaggtaagttgagttcattattaatggctgcatatgacccagaaacagatacattcaaa
actgtatgtaaagtagcatctggctttagtgatgctgaattagatgaattgcaaaagaaa
ttaatggagattaagttagataaaaaagatccaagagtcgattcacaattagaacctgac
atatgggtagaacctaaatatgtggctgagattataggtgcggaaataacactatcacca
gaacacacgtgctgtaaagatatggtgtctaaaggtgcaggattgtcggtaagatttcct
cgatttataagatggagggatgataaaagcatagaggatgctacaactcctaaagaaatt
tatgaaatgtacaaaatgaaattaagaaagaaggaagaagaacagcgtattgatgaaaca
taa

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