Sulfolobus sp. S-194: EWF20_03525
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Entry
EWF20_03525 CDS
T07725
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
sull
Sulfolobus sp. S-194
Pathway
sull03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sull00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EWF20_03525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sull03019
]
EWF20_03525
Messenger RNA biogenesis [BR:
sull03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EWF20_03525
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
EWF20_03525
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
QIW23306
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All DBs
Position
complement(695707..696438)
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AA seq
243 aa
AA seq
DB search
MIQLQKPRLILDNGLRLDGRKPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKE
MHPRHLALPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILVELFPRT
VIDIFMEVLQADAGTRLVSLMAASMALADAGIPMRDLIAGVAVGKADGVLVLDLNEPEDM
WGEADMPVAMMPSLKQVALLQLNGNMTPQEFRQALEMAQKGIETIYNLEKEAIRSKYAEL
KEE
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgattcagctacaaaaaccgaggctaatacttgataatggactacgattagacggtaga
aagccagacgaaatgagacctataaagatagaactgggtgttttgaagaatgctgatggt
tcagcaatattcgaaatgggaaatacaaaagttattgcggcggtctatggcccaaaagaa
atgcatcctaggcatttagctttgccagatagagcagtattaagagttagataccatatg
actcctttctctactgatgaaagaaaaaatcctgctcctagtcgaagagaaatagaactg
tctaaagtaataagggaggcattggagtcaacaatcttagtagaattatttccaagaact
gttatcgatatatttatggaagttttacaagctgatgcaggaacaagattagtttcttta
atggctgcatctatggctttggctgatgcaggaattcctatgagagacctgatagctggt
gtagcagttggaaaagctgatggagttctagtactagatttaaacgagccagaagatatg
tggggagaagctgatatgccagtagctatgatgccatcactaaaacaagtcgcattactc
caattaaatggaaatatgacacctcaagaatttagacaagcattagaaatggctcaaaaa
ggaattgaaacaatatataatttagaaaaagaagccattaggagcaaatacgcagaatta
aaggaggaataa
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