Sulfitobacter sp. DSM 110093: DSM110093_00074
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Entry
DSM110093_00074 CDS
T11886
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sulm Sulfitobacter sp. DSM 110093
Pathway
sulm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sulm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSM110093_00074 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulm03021
]
DSM110093_00074 (rho)
03019 Messenger RNA biogenesis [BR:
sulm03019
]
DSM110093_00074 (rho)
Transcription machinery [BR:
sulm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DSM110093_00074 (rho)
Messenger RNA biogenesis [BR:
sulm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DSM110093_00074 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
ATPase_2
NACHT
OB_RNB
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UOA30331
LinkDB
All DBs
Position
complement(79411..80682)
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AA seq
423 aa
AA seq
DB search
MTIETLNLADLKAQTPKNLLAMAEELEIENASTMRKGEMMFQILRERADDGWEISGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRKWSLRTGDTIEGLIKAPDDTERYFALTE
VTKINFEAPEKARHKVAFENLTPLYPDERLTMEVDDPTIKDRSARIIDLVSPIGKGQRSL
IVAPPRTGKTVLLQNIANSIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
ATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKIADKRVF
PAIDILKSGTRKEDLLVDKVDLQKTFVLRRILNPMGTTDAIEFLLGKLKQTKSNSDFFDS
MNT
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgaaacgctgaacctcgctgatcttaaggcgcagacgccgaaaaacctgctc
gccatggccgaagagctggaaatcgaaaacgcatcgaccatgcgtaaaggcgagatgatg
ttccaaattctccgcgaacgcgcggatgatggttgggagatctcaggcgacggtgtcttg
gaagtgttgcaagatggattcggtttcctgcgctctccggaagcaaactacctgccgggc
cctgatgacatctatgtctcgcccgacatgatacgcaaatggtcgctgcgcaccggggac
accatcgaagggttgatcaaagcgcctgacgacaccgaacgctatttcgcgctgactgaa
gtgaccaagatcaacttcgaagcgcccgaaaaagcacgccacaaggttgcctttgagaac
ctgacgccactgtaccccgatgagcgcctgacgatggaggtcgacgacccgacgatcaag
gaccgctcagcccggattatcgaccttgtgtcgccaatcggtaaaggccagcgttcgctg
atcgtggccccaccgcgcacaggtaaaaccgtgttgttgcagaacatcgcaaacagcatc
gaaaaaaatcacccagaatgttacttaatcgtcttgctgatcgatgaacgccccgaagaa
gtcaccgacatgcagcgttcggtgaagggggaggttgtgtcttccacctttgacgaaccc
gcgacccgtcacgtggccgtttccgagatggtgatcgaaaaggccaaacgtcttgtcgaa
cataagcgtgacgtcgtgatcctcctcgattctatcacgcgtttggggcgtgcgttcaac
accgttgtaccgtcctccggcaaggttctgaccggcggtgtggatgccaacgcattgcag
cgcccgaaacgcttctttggtgccgcacggaatatcgaagagggcggctcactcaccatc
atcgcgactgcgctgatcgatacgggcagccggatggacgaagtgatctttgaagagttt
aaaggtaccggtaactctgaaatcgtgcttgatcgcaagatcgctgacaaacgcgtcttc
ccagcgatcgacattcttaaatccggcacacggaaagaagacctattggtcgataaagtc
gacctccaaaagacgttcgtgttgcgccgtattctcaacccgatgggcacgactgacgcg
atcgaattcctgctgggtaaactaaagcaaacaaagtcaaattctgacttcttcgactct
atgaacacctaa
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