Sulfitobacter sp. DSM 110093: DSM110093_02141
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Entry
DSM110093_02141 CDS
T11886
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sulm Sulfitobacter sp. DSM 110093
Brite
KEGG Orthology (KO) [BR:
sulm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DSM110093_02141 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulm03021
]
DSM110093_02141 (rpoD)
Transcription machinery [BR:
sulm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSM110093_02141 (rpoD)
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NCBI-ProteinID:
UOA32349
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Position
complement(2167642..2169624)
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AA seq
660 aa
AA seq
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MAAKDTNDDAKTDDSEAGHSLDMSQAAVKKMIGEAREKGYITYDQLNTVLPPDQVSSEQI
EDVMSMLSEMGINIIEDEEAEEEEAKGSTEVTTTESNRDVALSSGTSEKLDRTDDPVRMY
LREMGSVELLSREGEIAIAKRIEAGRNTMIAGLCESPLTFQAITIWRDELLSEDILLRDV
IDLEATFGTQMGDEEETTPVVAPTANNETKSGESKPEYDADGNPISSDDDDDEDEQANMS
LAAMEEALKPQVLEALDIIADDYEKLSAMQDSRISATLNEDGSFTKDEEAMYQKLRSEIV
LLVNELHLHNNRIEALIDQLYGINRRIMQIDSAMVKLADQARINRKEFVDNYRGYELDPN
WMERMAEKSGRGWQMFIERSSEKVDELRNDMAQVGQYVGLDISEFRRIVQQVQKGEKEAR
QAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATW
WIRQAITRSIADQARTIRIPVHMIETINKLVRTGRQMLHEIGREPTPEELAEKLQMPLEK
VRKVMKIAKEPISLETPIGDEEDSQLGDFIEDKNAVLPLDSAIQENLKETTTRVLSSLTP
REERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagatacgaatgacgacgcaaagaccgacgattccgaagcaggccactcg
ctcgacatgagccaagccgccgtcaaaaagatgatcggtgaggcgcgcgagaagggctat
atcacctatgatcagctcaataccgtgctcccgccggatcaggtcagttcggagcagatc
gaagacgtgatgtcgatgctgtccgaaatgggcatcaacatcatcgaggatgaggaagcc
gaagaggaagaggccaagggctcgaccgaggttaccaccaccgaatccaaccgcgatgtt
gcgctgtcttcgggcacgtccgaaaagcttgaccgcaccgatgacccggtgcgcatgtac
ctgcgcgagatgggcagtgttgaactgctcagccgcgaaggcgagatcgccatcgccaaa
cgcattgaggctggtcgcaacacgatgatcgccgggctgtgcgaaagcccgctaactttc
caagcgattaccatctggcgcgacgaacttttgtccgaagacattctgctgcgtgacgtg
atcgaccttgaggcgacatttggcacccagatgggcgatgaggaggagaccacacccgtc
gtcgctccgacagccaacaacgagacaaagagcggagaatcgaagcccgagtacgacgct
gacggcaatccgatctcgtccgacgatgatgacgatgaggacgaacaggccaacatgagc
ttggctgcgatggaagaggcgctgaaacctcaggtgctcgaagcgctcgacatcatcgcg
gatgactacgaaaaactcagcgcgatgcaggacagccgcatctcagccacgctgaacgaa
gacggctccttcaccaaagatgaagaagcgatgtaccaaaagctgcggtccgagatcgtg
ttgttggtcaacgagctgcatcttcacaacaaccgtatcgaagccctgatcgaccagctt
tacggcatcaaccgccgcatcatgcagatcgacagcgcgatggtgaagcttgccgaccaa
gcgcgcatcaaccgcaaggaattcgtcgacaactaccgcggctatgagcttgatccaaat
tggatggagcggatggccgagaaatccggtcgtggctggcagatgttcatcgaacgctcc
tcggaaaaagtggatgaactgcgcaatgacatggcgcaggttggtcagtacgttggtctt
gatatctctgaattccgccgcatcgtgcagcaagttcagaagggcgagaaagaagcccgt
caggccaagaaggaaatggtcgaagcgaacctgcgtctcgtcatctccatcgccaaaaag
tacacgaaccgtggcctgcaattccttgatcttattcaagaaggcaacatcggtctgatg
aaggccgtggacaagttcgagtaccgccggggctataaattctcgacctatgcgacatgg
tggatccgtcaggcgatcacccgttccatcgccgatcaggcgcgcacgatccgtattccg
gtgcatatgatcgagacgatcaacaagctggtgcgcaccggtcgccagatgctgcacgag
attggccgcgagccaacgccagaggaactggccgagaagctgcaaatgccgcttgaaaag
gtccgcaaggtgatgaaaatcgccaaagagccgatctctctcgaaacgccaatcggcgac
gaggaagacagccagcttggcgatttcatcgaggacaaaaacgcggtgctgccgctggac
tccgccattcaggaaaacctgaaggaaaccacaacccgcgtgctctcgtcgctcaccccg
cgtgaggaacgtgtcctgcggatgcgttttgggatcggcatgaacaccgaccatacgctc
gaagaggttggtcagcagttctcggtgacccgcgaacgtattcgtcagatcgaagccaag
gcgctccgcaagctgaaacatcccagcaggtcgcgcaaactgcgctccttcttggatcaa
taa
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