Sulfurimonas xiamenensis: FJR47_02715
Help
Entry
FJR47_02715 CDS
T06240
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
suln
Sulfurimonas xiamenensis
Pathway
suln03420
Nucleotide excision repair
suln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
suln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJR47_02715
03430 Mismatch repair
FJR47_02715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suln03400
]
FJR47_02715
Enzymes [BR:
suln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJR47_02715
DNA repair and recombination proteins [BR:
suln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJR47_02715
MMR (mismatch excision repair)
Other MMR factors
FJR47_02715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_30
AAA_11
REP_ORF2-G2P
Motif
Other DBs
NCBI-ProteinID:
QFR42878
UniProt:
A0AAJ4DM73
LinkDB
All DBs
Position
complement(507687..511727)
Genome browser
AA seq
1346 aa
AA seq
DB search
MKGLNDRQIQAVEAIGNTIVISGAGAGKTTVFVERLQKLLRANYPDKILALTFTQKAANE
FNHRLNTREEMKYLGTFHAVFFKLLQSMTQFEQSKYSYLSSMQIYDEYRYNYYLEHNFHS
ELFDTKQFKVKIESPLKLSEFISKNIELALECENIEMFFEKLNVLLKEKLHYKSNINIIQ
AFFEQKRANGVLNFDDILIETYFFIKEDEFNRTTLQKKFNHILVDEFQDTNSIVLEILQM
IQTNNLFMVGDPYQSIYSFQGANFKKTIELIEATPIIQLNTNYRSSKNIVNFSNAFIDTS
LTEKLEDIQPVTATDEKPNSDIKVLENISDFTLPELIHKSNDELNDICILARNNYHIQEI
KDILEKWQVPYQKRNYQELEYILYAMLLMIKNNYVADDIYFERFEIDEWRKIIDAAQAHS
IVDTVAAITQIFHSNNITNYLINRGYEELEERLHIWQDKIYKIFSQENTELFLKNVQTRL
NHWLQEQNYITQDGVQIMSIHKSKGLEFNTVILYNFEDGVFPRNLDDEEEKRLYYVAITR
AKENLIITSKKEINTYTKNLLHKPYMQHQVVSNPNKQTLEFENSFYDDIDFTGSDRVAFI
EIDEVTYTQKYQDSNAKALINNFIKETNKQLQTKKIKDINALSTDDIEFMLLLLEEFKTI
NEIYNIPLKVAINAIDTTRELFLNDERINYDYLNNTFTDAIHHLINYTNWADIDVESDDV
LWMKRFKKIVVNAVSKKYTDITKEKSKKALEIRQAKIDKKLKNSHIYEYEEFVASMKNDY
FIKSDKEKRYFTNTVLGMYDTLNEQPMVDLSDEKYQTLLRDTIIDFGYDQLNGYQYQQEM
LMGNFINNRKKLLATKRWSKIKYIEHKNQDKRASFITFTLPSEWHRWKTKAKSLTEERKY
GDKAILEDNPNFQMCGHNLEEHIINSAKKINEVWTYFYHILKTSISNYQKRYPEFTNADV
AYFRQLEPHKNMTSHIHILIFVDDEIDYLVRDAYRKTIINFNLNPKFNDFQKILKVEDVK
SIDFNKLLLEKLELIQEIRNLEDNFASELVIKKAQKRLTKIDKILFNKVASPASYIAKYT
MKNAFADNDDDKDILFFNAWESMLGSEVKITGISNYEHTTQLHLDKMYKWYQENAPHVLS
AMKRTNKPLYYWLEKEELNGNFRFEYERRVKEGFKNAEFLKDVNSLFLDTRNDNVTDDVV
WEHAANEVLHDSKDYTHIRTDKKIIGFYVSKTLIDKHLDSRCVLRHNISKRRADYPHHSF
LPTEDMIDTIYTQANANLEILDGKLYQKLYVEDMYIKGYISEDEIMSYVDFMIDEAYLQK
IKNYPNYKDNVQKEMQLSFLEPLLVA
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaggattgaacgacagacagatacaagcagttgaagcaattggcaacactattgtt
atcagcggtgctggagctggtaagacaactgtatttgtcgagaggctgcaaaaactttta
cgcgccaactatcctgataaaatcttagcccttaccttcactcaaaaagcggcaaacgag
ttcaaccacagattaaacacgcgtgaagagatgaaatatcttggcacattccacgcagta
tttttcaagctgctgcaaagcatgacccagttcgagcaaagcaaatacagttatctctca
tcgatgcagatatacgatgaatacagatacaactactaccttgagcacaattttcacagc
gagctatttgacacaaaacagttcaaagtaaaaatagaatcccctttaaagctaagtgag
ttcatcagcaaaaacatagagctcgctctagagtgtgagaacattgagatgttttttgaa
aaattaaacgtgctgcttaaagagaagctacactataagtctaatatcaacatcatccaa
gcattctttgagcaaaaaagagcaaatggagttttaaactttgatgatatcttgatagaa
acttatttttttatcaaagaggatgagttcaacagaacaacgctgcaaaagaagttcaat
cacatcttggtagatgagtttcaagataccaatagcattgttttagagatattgcagatg
atacagaccaataatctctttatggttggagacccctatcaaagcatttatagctttcaa
ggtgcaaatttcaaaaagaccattgagctgatagaagcaacacctatcatccagcttaat
acaaactaccgctcaagtaaaaacatcgttaatttttccaacgcatttattgatacgtca
ctaactgaaaagttagaggacatccaaccagtaacggctacagatgagaagccaaactca
gatatcaaagtgcttgaaaatatctctgattttaccttgccagagctgattcacaaaagc
aatgatgagttgaatgatatctgtatcttggcacgaaacaactatcatattcaagagata
aaagatattttagagaagtggcaagtgccataccaaaaaagaaactatcaagagctggaa
tatatcctatatgccatgttgctgatgataaaaaacaattacgtcgctgatgatatctac
tttgaacggtttgaaatagatgagtggcgaaaaataattgatgcggctcaggctcatagt
atcgtagatacagttgccgctattacacagatatttcactctaacaacatcacgaactat
cttatcaacagaggctatgaagagttagaggagcgactccatatctggcaagataagata
tacaagatattttctcaagaaaatacagagttatttttaaaaaatgtgcaaacgcggctc
aatcattggctccaagagcaaaactatatcacacaagatggtgtgcaaatcatgagtatc
cataaatccaaaggcttggagtttaacaccgtcatactatacaactttgaagatggagtt
tttccaagaaacctagatgatgaagaggagaagcgactttattatgtagctatcacgcga
gcaaaagagaaccttatcatcacaagcaaaaaagagattaacacctacacaaaaaatctg
cttcataagccatatatgcagcatcaagttgtatctaaccccaataaacagacacttgaa
tttgagaactcattttacgatgatatagactttacagggagcgatagagtagcattcata
gaaattgatgaagtaacatatacacaaaaatatcaagactccaatgccaaagcacttatc
aacaattttattaaagagaccaataaacagctgcaaaccaaaaagataaaagatatcaat
gcactaagcacagatgatattgagtttatgctgcttttacttgaggagtttaaaaccatc
aacgaaatttacaacatccctttaaaagttgccatcaatgcaattgatactacaagagaa
ctgtttttaaacgatgagcgtatcaactatgactatctcaacaacacctttacagatgct
atccaccatcttatcaattatactaactgggctgatattgatgtagagagtgatgatgtc
ttgtggatgaaacgcttcaaaaagatagttgtaaatgcagtatctaaaaaatataccgac
attacgaaagaaaaatccaaaaaagctcttgagatacgacaagctaaaatcgataaaaag
ctaaaaaactctcatatctacgagtatgaagagtttgtagcaagtatgaagaacgattac
ttcataaaaagtgacaaggaaaaaagatattttaccaatacggttctagggatgtatgac
acattaaatgagcagcctatggtggatttatcagatgaaaaatatcagacacttcttcgt
gatacgataatagattttggctatgaccaactaaatggttaccaataccagcaagagatg
cttatgggtaacttcatcaacaaccgaaaaaagctcttagcaacaaagagatggtcaaag
ataaaatatattgagcacaaaaaccaagacaaacgagcttcctttattacctttacgctg
ccaagtgagtggcatcgctggaaaacaaaagctaaatctctaacagaggaacgcaaatat
ggagacaaggcaatcctagaagataatccaaactttcaaatgtgcggacataatctagaa
gagcatatcatcaactctgctaaaaaaataaatgaggtatggacatatttttaccacatc
ctaaaaacaagtatcagcaactatcaaaagagatatccagagtttacaaacgctgatgtt
gcatattttaggcagcttgagcctcataaaaatatgacgagccatattcatatactgata
tttgtagatgatgagatagattatttagtaagggatgcttacagaaaaaccattatcaac
ttcaatctcaatccaaagttcaatgattttcaaaagatactaaaagttgaggatgtcaag
agtatagactttaataagctgcttttagagaagctggagttaattcaagaaattagaaat
ttagaagataattttgcaagtgagttagttatcaaaaaagcgcaaaagagacttacaaaa
attgataagatactctttaacaaagtagcttctccagcctcatatatcgccaaatatact
atgaaaaacgcttttgcagataatgatgacgataaagatatcctatttttcaacgcatgg
gaatctatgcttggctctgaagtgaaaatcacaggcatatcaaactatgagcacacgaca
caattgcacttagataagatgtataaatggtatcaagagaacgcgccacatgttttaagt
gctatgaaacgcacaaataaaccgctttactactggttggagaaagaggagctaaacggc
aattttaggtttgagtatgaaagacgtgtcaaagaaggatttaaaaacgcagaattttta
aaagatgtaaacagtcttttcttggatacccgtaacgataacgtaacagatgatgtagtc
tgggagcatgctgccaatgaagtgctgcatgatagtaaagattacacccatattaggacc
gacaaaaaaatcatcggcttttacgtgagcaaaacacttatcgataagcatttagacagc
aggtgtgttttacgacataatatttccaaacgaagagcggactatccacatcacagcttt
ttaccaacagaggatatgattgatacaatatacacccaagcaaacgccaacctagagatt
ctagatggtaagttgtatcagaagctttatgttgaagatatgtatatcaagggatatatc
agtgaagatgagattatgagctatgtagattttatgattgatgaagcctatctgcaaaaa
ataaaaaactatccgaattacaaagacaatgttcaaaaagagatgcagctctcctttctt
gaaccactactagtcgcttaa
DBGET
integrated database retrieval system
