Sulfurimonas xiamenensis: FJR47_04120
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Entry
FJR47_04120 CDS
T06240
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
suln
Sulfurimonas xiamenensis
Pathway
suln03030
DNA replication
suln03430
Mismatch repair
suln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FJR47_04120 (dnaE)
03430 Mismatch repair
FJR47_04120 (dnaE)
03440 Homologous recombination
FJR47_04120 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suln03032
]
FJR47_04120 (dnaE)
03400 DNA repair and recombination proteins [BR:
suln03400
]
FJR47_04120 (dnaE)
Enzymes [BR:
suln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FJR47_04120 (dnaE)
DNA replication proteins [BR:
suln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FJR47_04120 (dnaE)
DNA repair and recombination proteins [BR:
suln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FJR47_04120 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
MCM10_OB
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QFR43131
UniProt:
A0AAJ4DML0
LinkDB
All DBs
Position
795454..799062
Genome browser
AA seq
1202 aa
AA seq
DB search
MSVLPFTHLHLHTEYSLLDGANKLSNLVTQVKKLGMTSVAMTDHGNMFGAIDFYKLMKDA
GIKPIIGIEGYIHNGENIDDKSTKQRFHICLFAKNQKGYENLMYLSSKAFIDGFYYFPRI
NKKELREHSEGLICSSACLQGEINWHLNTANERNIKNGALGYEGAKAAALEYKEIFGDDF
YLELMRHGIGDQLFIDDQILKLSKELDIKIIATNDTHYTFPNDAQYHEAFMCIGMNKLYD
DPNRMRHSVHEFYLKSPDQMARLFADIPEALENTQEIVDKCNLELKLGDPVPPNFKFTKE
YAKNEGLDIDNEDDAPLGDDATKEQKRAWKSAADKNDADYFVYRCELGLEQRLKHVPQEK
HQQYRDRLNFEMDVINSMKFPGYMLIVWDFVKVAKEMGIAVGPGRGSAAGSLVAYSLEIT
DIDPMKYDLLFERFLNPERVSMPDIDMDFMQARRGEVIDYVVKKYGRNQVAQIITFGSLL
AKGVIRDVARVLDMPLSQADKMAKLVPDELGITLNGKTKNGDFIPGAFQKEPKLQEFIES
DANAARVWEFAKKLEGLKRNSGIHAAGVVISNEELWKKTPIYKPSGEETFVTQYSLNYLE
DVDLIKFDFLGLKTLDVIDNAIKLIKLRYNKEIKWHEIDENDPKVYDVIRSGNTVGMFQI
ESSGMQDLNKRLKPDSFEDLIAVLALYRPGPMESGMLESFIERKHGREKIEYTFDTMQPI
LENTYGVIVYQEQVMQIVQTVGGFSLGYSDIIRRAMGKKKDMSTYNDEFAKGAQKQGFDY
NEASKLFDLIEKFAGYGFNKSHSAAYAMVTFQTAWLKTYYPNEFMAALLTSDKDNTDKVV
RYIDETKRMGIELSPPDICDSQLEFSAITKDGKEIVLFGLGAIKGVGQSAVLSILETRKE
GGDFTSIEDFVNRIEPSKVNKRVIESIIKAGGFDRFGFSRKALLDQVEKIVDTAKDASMA
RKNAVGSLFSDDSEITTVELKLINSQEYELKEILEFEKETLGFYVSGHPLDEYREKIEEL
EYTLSSEIESVKDGSYAIFIGKVEEITKKTSKKGNQFGIVNIMDFHGNIEVMLFSDKLEE
LNQMNLNEPIAFKTKITHTDMFTRISVSKIMTLKDAKKETKKTKKEVREIPLEPINLSIK
LDTDMKVIEDLYRIVRQNPGNRELKITIISKLQNVIIDSAIRVDSKILTALDGNEFVDIL
AS
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttttaccatttacacacttacatcttcacactgaatattcacttctagacggt
gcaaataaactctcaaatcttgtaacacaggtaaaaaaacttggcatgacttctgttgct
atgacagatcacggtaatatgttcggtgcaatagatttttacaaacttatgaaagatgcc
ggaataaaacctattattggaatagagggatatattcataatggtgaaaatattgatgat
aaaagcacaaaacagcgatttcatatctgtctttttgccaaaaatcaaaagggttatgaa
aaccttatgtatctctcatcaaaagcttttatagacggtttttactactttccgaggatc
aataaaaaagagcttagagagcactctgagggtcttatatgcagctctgcgtgtcttcaa
ggcgaaataaactggcatttaaatacggcaaacgaaagaaatattaaaaacggcgccttg
ggatatgagggagccaaggctgctgcacttgagtataaagaaatttttggtgatgatttt
tatcttgaactaatgcgtcacggaataggcgatcagctttttattgatgatcagatatta
aagctctccaaagaacttgatataaaaataattgccacaaatgacactcactatacattt
ccaaatgatgcgcagtatcatgaagcatttatgtgtataggaatgaataaactctatgat
gacccaaaccgcatgcgtcactctgtgcatgaattttatctcaaaagcccagatcagatg
gcgcgtctctttgccgatattcccgaagctcttgaaaatacacaggagattgtagataag
tgcaatctggagctaaaactaggtgacccagttcccccaaattttaaatttacaaaagag
tatgcaaaaaatgagggactagatattgataatgaggatgatgcaccgctgggagatgat
gcgactaaagagcaaaaaagagcttggaagagcgcagcggataaaaatgatgcagactat
tttgtttatcgttgtgaacttggtttggaacaaagacttaagcatgtacctcaagaaaaa
catcagcagtatagagatagacttaatttcgagatggatgttataaactccatgaaattt
cccggttatatgttgattgtctgggattttgtgaaagttgcaaaagagatgggtatagct
gtaggaccgggtcgtggttcggcagcaggaagtcttgttgcatactcattagagattaca
gatattgatcctatgaagtatgatcttctttttgagagatttctcaatccagaacgcgta
agtatgcccgatattgatatggactttatgcaggcgcgccgcggagaagttattgattat
gttgtaaaaaagtatggacgaaatcaggtagcgcagattattacatttggttcgcttttg
gcaaaaggggttattcgtgatgttgcgcgtgttcttgatatgcctctttcacaggcggat
aaaatggcaaagcttgttccagatgagcttggaatcacacttaacggtaaaacaaaaaat
ggtgattttataccaggcgcttttcaaaaagaacctaagcttcaagaatttatagagagt
gatgccaatgctgcaagagtctgggagtttgctaagaaactcgaaggtctcaagcgtaat
tccgggatacatgctgccggcgttgttatctcaaatgaggagctttggaaaaaaacacct
atctataagccatcgggtgaagagacttttgtaacacaatattcactaaattacttagaa
gatgttgatttgattaagtttgactttttagggcttaaaacacttgatgttatcgacaat
gctataaaacttataaaattgagatacaacaaagagattaaatggcatgagatagatgag
aatgaccctaaagtttatgatgtgattcgcagcggaaacacggtaggaatgtttcagata
gagagttcgggaatgcaggatctaaataagcgacttaaacccgacagttttgaggacctc
attgcggtcttggcgctttatcgcccgggaccgatggagtctggaatgcttgagagtttt
atagagagaaagcatggaagagagaagattgagtacacatttgatacgatgcaacctatt
ttggaaaatacatatggagtcatcgtttatcaagaacaggttatgcagatagtacaaacc
gtgggcggtttttctctcggttattcggatattattcgtcgtgcaatgggtaagaaaaag
gatatgtctacttataatgatgagtttgcaaaaggagctcaaaagcagggatttgactac
aatgaggcatctaaactttttgatttgattgagaagtttgcgggatacggttttaacaaa
tcccactctgcagcttatgcaatggttacatttcaaacagcatggctaaaaacttactat
ccaaatgaatttatggcggcacttttaacatcagataaagataataccgacaaagtcgtg
cgctatattgatgagacaaagagaatgggcattgagctctcacctccggatatttgtgat
tcacagctagaattttccgcaattacaaaagatggcaaagagattgttctttttggttta
ggtgctattaaaggagttggacaatcagcagttctttctattttagaaacaagaaaagag
ggtggtgattttacatcaatagaagattttgtaaataggattgaaccctcaaaagtaaat
aaaagagtgatagagtctattataaaagcgggcggttttgacagatttggattttccaga
aaggctcttttggatcaagttgaaaagatagtagatactgcaaaagatgcttcaatggca
agaaaaaatgcagtaggaagtctttttagtgatgatagtgaaattacaaccgttgagtta
aagttaataaattctcaagagtatgagttaaaagagattttagaatttgaaaaagagaca
ttgggcttttatgtctcaggacacccgcttgatgagtatagagaaaagatagaggagctg
gagtatacgctatcatcagagatagagagtgttaaagacggttcgtatgcaatttttatc
ggaaaagttgaagagataacaaaaaaaacatccaaaaaggggaatcagttcggcattgta
aatattatggattttcacggaaatattgaagttatgctctttagcgacaaactcgaagag
ttaaatcagatgaacttaaacgagcctatagcttttaagacaaaaattactcatacagat
atgtttacaagaatcagcgtaagtaaaattatgacgcttaaagatgctaaaaaagagaca
aaaaagacaaaaaaagaggtacgagaaatacctcttgagcctataaatctttctataaaa
ttagatactgatatgaaagtaattgaagatttatatagaattgtcagacaaaatccagga
aatagagagctaaaaatcaccataatctcaaaacttcaaaatgttataatcgactcggct
ataagagtagacagcaaaattttaacggcattggacggtaacgagtttgttgatatttta
gcttcataa
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