Sulfolobus sp. E11-6: GFS33_01840
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Entry
GFS33_01840 CDS
T07647
Name
(GenBank) DEAD/DEAH box helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sulo
Sulfolobus sp. E11-6
Pathway
sulo03022
Basal transcription factors
sulo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sulo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GFS33_01840
09124 Replication and repair
03420 Nucleotide excision repair
GFS33_01840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulo03021
]
GFS33_01840
03036 Chromosome and associated proteins [BR:
sulo03036
]
GFS33_01840
03400 DNA repair and recombination proteins [BR:
sulo03400
]
GFS33_01840
Enzymes [BR:
sulo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GFS33_01840
Transcription machinery [BR:
sulo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GFS33_01840
Chromosome and associated proteins [BR:
sulo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GFS33_01840
DNA repair and recombination proteins [BR:
sulo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GFS33_01840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
PhoH
AAA_34
Motif
Other DBs
NCBI-ProteinID:
QGA67726
LinkDB
All DBs
Position
complement(312857..314509)
Genome browser
AA seq
550 aa
AA seq
DB search
MELREWQSKIAEKVVEALRNNFLVSLQAPTGSGKTLFALYASFKVKPKVAFVVRTHNEFF
PVYRELSLHFKDKKYGFLIGKSSACVFSSSDVDPQDIYCSGCEIFNASTITITDSPKSSL
NKLKKEGKELGFCPYYSLLESIKNVDVVLLTYPYLFIPWLRESLDINWENYVVVIDEAHN
IENVSNIEEKKLNKRIIEMAISQTKSQNVRLILERLKENIEKVIYSEDKYILIEKEKLAN
IVSSEDEIDSIAEEYEEIRKSMIKNKTISRNYLGSILRFFDLVNDERVRVFSYSNSLVAK
YIIPSYFTDILNDEKITYMLMSGTMQPLDYLRNIIGINRKILYIDAEKVMRKRLTGTYEC
LIATDVTTTYSLRSEQMARKYASYLLKIFYNSKRNVLAIFPSYEFMRIVSKFLNIRYFAE
DAETNIEEMMNNVKKEKTIIMGIARGKLAEGIEIVENGTSLISDVAMVGIPYPPIDDYLK
IRIEEISKRLKKDISNELIGIQALIAVKQSIGRAIRGPMDSATIWLLDKRYDSLWWKKEL
NCLNARKIKL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggaacttagagagtggcaaagtaagatagctgaaaaggttgttgaggcattaagaaat
aattttttagtctcattacaagcacctactggtagtggtaagactctatttgctctttac
gcttcattcaaggttaagccaaaagtggccttcgttgtcagaactcataatgagtttttc
ccagtttacagagaactatctttgcattttaaagataaaaaatacggatttttaattggg
aaatcttctgcgtgtgtttttagttcttccgacgttgatcctcaagatatatattgtagt
ggatgtgaaattttcaacgcgtccacaattactataactgattcaccaaagtcgagtctg
aataaactaaagaaggagggtaaagaattaggattttgcccatattattcgctcttggag
agtataaaaaatgttgatgtagtactactcacatatccttatctgtttataccctggctt
agagaatccttagatattaattgggagaactatgttgttgtaatagatgaggctcacaat
attgagaatgtttctaatatagaagagaaaaaactaaacaaaagaatcatagagatggca
atttctcaaactaaatcacagaatgtaagattaatattagagaggcttaaggaaaatata
gaaaaagtaatttattcagaagataaatatatacttattgaaaaggagaaattggctaat
atagtttcttcagaggatgaaattgatagtatagcagaggaatatgaagaaattaggaaa
agtatgataaaaaataagacaataagtagaaattatcttggctcgattttaaggtttttt
gatttagttaatgatgaaagagttagagttttttcatattcaaattctctagtcgctaaa
tatataataccatcctactttactgatatactaaacgatgagaaaattacttatatgtta
atgtcaggtactatgcaacccttagattatcttagaaatattatagggattaatagaaaa
atattatatattgatgcggagaaggttatgagaaagagattaactggaacatatgagtgt
cttatagctacagatgtaacaactacttatagcctaaggtcggaacagatggcacgtaaa
tatgcatcgtatttattaaaaattttctacaattctaaaaggaatgttttggctatattt
cctagctatgaatttatgcgaattgtatctaaatttctaaacataagatattttgcagag
gatgcagaaacaaatattgaagagatgatgaataatgtgaaaaaagaaaaaacaattatc
atgggtatagcaaggggtaagctagctgaaggaattgaaatagtcgaaaacggaactagt
ttaatatcagatgtcgcaatggtaggtatcccttatcctccaatagacgattacttaaaa
atacgtattgaggaaatatcaaagagattgaaaaaggatatcagtaacgaattaattgga
atacaagcattgatcgcggtaaaacaatctataggtagagctattagaggtccaatggat
agtgcgactatatggcttctcgataaaagatatgatagtctgtggtggaagaaagaactt
aattgcttgaatgcaaggaaaattaaactgtga
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