Sulfolobus sp. E11-6: GFS33_02555
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Entry
GFS33_02555 CDS
T07647
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sulo
Sulfolobus sp. E11-6
Pathway
sulo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sulo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GFS33_02555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sulo03019
]
GFS33_02555
03009 Ribosome biogenesis [BR:
sulo03009
]
GFS33_02555
04131 Membrane trafficking [BR:
sulo04131
]
GFS33_02555
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sulo04147
]
GFS33_02555
Messenger RNA biogenesis [BR:
sulo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GFS33_02555
Ribosome biogenesis [BR:
sulo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GFS33_02555
Membrane trafficking [BR:
sulo04131
]
SNARE
SNARE associated proteins
Others
GFS33_02555
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GFS33_02555
Exosome [BR:
sulo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GFS33_02555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
TIP49
AAA_33
AAA_14
IstB_IS21
AAA_28
nSTAND3
AAA_18
Mg_chelatase
RNA_helicase
Vps4_C
ABC_tran
Parvo_NS1
ATPase_2
AAA_24
NPHP3_N
AAA_3
Sigma54_activat
AAA_17
AAA_lid_PRS2_C
TsaE
AAA_7
Zeta_toxin
NB-ARC
ATP-synt_ab
NACHT
DUF815
AAA_25
Bac_DnaA
ATPase
PhoH
SPT16
Motif
Other DBs
NCBI-ProteinID:
QGA67841
UniProt:
A0A5Q0TS24
LinkDB
All DBs
Position
complement(430212..432521)
Genome browser
AA seq
769 aa
AA seq
DB search
MSASSGEEQKPQRKELILRVMEARQKDVGRGKVRIDIDLLSQIDVSPGDVVEIEGTRKTA
ALAWPLSPEDTTTGEKDIIRMDGITRKNAGVSIGDKVIVRKAVVRPASTVKLAPSNFSIT
VDPGFISYVKKRLKEFPLVEGDTVLIPVLGQAIPFTVVQVKPAGIVLVNDDTIISISDKP
VEPSRYPRVTYEDIGGMKNIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKT
LLAKAIANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPK
RDEVIGEVERRVVAQLLTLMDGLENRGNVIVIAATNRPSAVDPALRRPGRFDREIEIPLP
DKQGRLEILQIHTRNMPLSKDVDLEKLADMTHGYTGADLSALVREAAMNALRRYLPKIDL
NQDKIPPEILESMEVKMEDFINAFKEIVPSGLREIYIEVPEVKWTDIGGLEEIKEELKEV
VEYPLKYSELYQNSGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWV
GESEKAVREIFRKARMYAPAVIFFDEIDSIAPIRGISYDSGVTERIVNQLLAEMDGIEKL
ENVVVIAATNRPDILDPALLRPGRFEKLIYVPPPDKKARIEILKVHTRNIVLGEDISLED
VAEKTEGYTGADLAALVREATMRAIRESMKICIDKANENCKSTDTECRDKTMKECMKVNG
VKVSLRHFEEAMKKVKPSITQDMLQFYQNWVEKARQQLPKTTVKPSTYA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgctagttctggagaggaacagaaaccgcaaagaaaggagttaatacttagagta
atggaagcaagacaaaaagatgttgggagaggaaaggtacgaattgacatcgatttactt
tcacaaattgatgtaagcccaggtgacgtagttgaaattgagggaacaagaaaaactgca
gcactagcatggcctttatcaccagaggatacaacaactggagaaaaggacataatacga
atggatggaatcaccaggaaaaacgctggagtctcaattggagataaggttatagtaaga
aaagcagttgtaaggccagctagcacagtaaaactagcaccatctaacttctcaattact
gtagatccaggtttcattagttatgttaagaaacgattaaaagaatttcccctagttgaa
ggagatacagtgttaattcctgtcctaggccaagccataccgtttactgtagttcaagtc
aaaccagctggtatcgttctagtgaatgacgatacgataataagtatatctgataagcca
gtggaaccttccagatatcctagagtcacatatgaggacataggtggaatgaaaaatatt
atagaaaaagttagagagttagttgagctacctttaagacatccagaactatttaaacga
ttaggaatagagccgcctaagggtatattattatatggccctcctggagtgggaaagaca
ttactagcaaaagcaatagctaatgaaactgatgcgtactttacttcaattaacgggcca
gaaataatgagcaaattctatggagagagtgaacaaagattaagggaaatatttgaagac
gctaaaaaacatgctcctgcaataatattcgtagatgaaattgacgcaatagcaccgaaa
agagacgaagtgataggagaagtagaaagaagagttgttgcacagctactcactttaatg
gatggtctcgaaaatagaggaaacgtaatagtaatagctgcaaccaatagacctagtgct
gttgatccagccctaagaagaccaggaagatttgatagagaaatagaaataccgttaccg
gataagcaaggaagattagaaatactacaaatccatacaaggaacatgcccctgtctaaa
gatgttgacctagagaagcttgcagatatgacacatgggtatactggtgctgacttgtca
gcattagtaagagaagccgcgatgaacgccttaagaagatacttgccaaagatagacttg
aatcaagataagatacctccagaaatactagagtctatggaagttaagatggaagatttc
ataaacgcatttaaagaaatagtaccaagtggcttaagagaaatttacatagaagttcca
gaagttaaatggacagatataggcggccttgaagaaataaaagaggagttaaaagaagta
gttgaatatcctctgaaatactcagagttataccaaaattctggtatagagccacctaag
ggtatattgctgtttggtccaccgggaactggaaagacaatgctggcaaaggctgtggca
actgagagcggagcaaacttcatagcagttagaggaccagaaatattatccaaatgggta
ggtgaaagtgaaaaagcagttagagaaatatttagaaaagctagaatgtacgcaccagct
gtaatattctttgacgaaatagattcaatagcaccaataagaggaatctcttatgattca
ggagtaacggagagaatagtaaatcagttattagcggaaatggatggaattgaaaaacta
gaaaacgtagtagtaatagctgcaaccaatagaccagatatcttagatccagcactatta
aggccaggtagatttgaaaagttaatatatgtacctccaccagataagaaagcaagaata
gaaatattaaaggttcatactagaaacatagtgttaggagaggacatcagcttagaggat
gtagctgaaaagactgaaggctatactggagctgatttagctgcattagtaagagaagct
acaatgagagctataagagagagtatgaaaatatgcatagacaaagctaacgagaattgt
aaatccactgacaccgaatgcagagataaaactatgaaagagtgtatgaaagttaacggg
gtcaaggtttccttaagacatttcgaagaagctatgaagaaagttaaaccatcaattacg
caagatatgctgcaattctatcaaaattgggttgaaaaggccagacaacaattaccaaaa
actacagttaaaccaagtacatatgcgtga
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