Entry |
|
Name |
(GenBank) RNA-binding protein
|
KO |
K03679 | exosome complex component RRP4 |
|
Organism |
sulo Sulfolobus sp. E11-6
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:sulo00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFS33_13320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:sulo03019]
GFS33_13320
Messenger RNA biogenesis [BR:sulo03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GFS33_13320
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
GFS33_13320
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2484484..2485227
|
AA seq |
247 aa
MSQSQKIILQPRSIVVPGELLAEGEFQIPWSPYILKINSKYYSTVVGLFDVKDTQFEVIP
LEGSFYYPKVNDVVIGLIEDVEIYGWVVDIKAPYKAYLPASNLLGRSVNVGEDLRRYLDV
GDYVIARIENFDRSIDPVLSVKGKDLGRVNNGIVIDIMPVKVPRVIGKNKSMYETLTSKS
GCSMFVANNGRIWATCPSRFSEEILIEAIRKIENESHIKGLTDRIKQFIEEKLGERNASS
GETKTNP |
NT seq |
744 nt +upstreamnt +downstreamnt
atgagtcagtctcagaaaattattttacagccaaggtcaatagtagtacctggcgagcta
ttagctgaaggcgaatttcagattccttggtctccctatatattaaagatcaatagtaaa
tattactccacagttgttggactttttgatgtaaaagatactcagtttgaagtgattcct
ttagaaggttcgttctactatcctaaggtcaacgatgtggtaataggtttgatagaggac
gttgagatctatggttgggtggttgacataaaagctccttataaggcatatttaccagcc
tcaaatcttttaggaaggtccgttaatgttggagaggatttaaggagatatttagacgtg
ggcgactatgttatagctagaattgaaaattttgataggtcaatagatcccgttttatca
gttaaaggtaaggacctaggtcgtgtcaataatgggatagtaattgatataatgccagtt
aaggttccgcgtgttataggaaagaataaaagtatgtatgagaccttgacctcaaaaagt
ggatgcagcatgtttgttgctaacaatggtaggatatgggctacttgtccttcccgcttt
tctgaagaaattttaattgaggcaattaggaagattgaaaatgagtcacatataaaagga
ttgacagatagaataaaacaattcattgaggaaaaattaggtgagagaaatgcttcaagt
ggagagaccaaaactaatccttga |