Sulfitobacter sp. PM12: AADW22_00025
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Entry
AADW22_00025 CDS
T10826
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sulp Sulfitobacter sp. PM12
Brite
KEGG Orthology (KO) [BR:
sulp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sulp03032
]
AADW22_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
sulp03400
]
AADW22_00025 (gyrB)
Enzymes [BR:
sulp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AADW22_00025 (gyrB)
DNA replication proteins [BR:
sulp03032
]
Prokaryotic type
DNA Topoisomerases
AADW22_00025 (gyrB)
DNA repair and recombination proteins [BR:
sulp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AADW22_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
B1
Motif
Other DBs
NCBI-ProteinID:
XKW78836
LinkDB
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Position
4453..6867
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AA seq
804 aa
AA seq
DB search
MSDTDQLPEEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADAVNVTIHDDSSVSVSDNGRGIPVGIHQEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSDWLELRIWREGKEHVARFEGGFTTKHLEVVGPTERTGTEVRFMASTE
TFSNLDYSFETLEKRLRELAFLNSGVRIILTDERPAEPLRTELFYEGGVKEFVKYLDRSK
TSVMPEPIFISGEKDDIGVEVAMWWNDSYHENVLPFTNNIPQRDGGTHTAGFRGALTRTI
NNYAQSSGIAKKEKVSFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVEGLV
NEKLAEWFEENPQIAKIVVGKIIEAAHAREAARKARDLTRRKTAMDVNFLAGKLKDCSEK
DPSKTEVFLVEGDSAGGSAQTGRDRQTQAILPLKGKILNVERARFDRMLGSQEIGNLVMA
LGTGIGRDEFNIDKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPQLIENGHLYIAQPP
LYKVSRGKSEVYLKDQAAMEDYLIQQGIEGAMLKQGNGEEITGQDLARVVDLARQMRRVL
EAFPTHYPRHILEQAAIAGAFVPGAVDADLQGVADKVAERLNLIALEWERGWQGRITQDH
GVRLARILRGVEEVRTLDGRMLRSGEAKRSGGFTEHLQDVYGTPAKLVRKDRSQLIHGPM
DLLEAILAEGEKGLSLQRYKGLGEMNPDQLWETTLDPDARTLLQVKVADMAEADDLFTKL
MGDVVEPRREFIQQNALSVENLDF
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaccgatcagctccccgaggaatatggcgcagattccattaaggttctcaaa
ggcttagaagcggttcgcaaacgtccgggcatgtatatcggtgacaccgatgacgggtcg
ggtctgcaccacatggtctatgaggtcgtggacaacggcattgacgaggcgctggccggt
catgcggatgcggtgaacgtcacaattcacgatgacagctctgtttcggtcagtgacaac
gggcgcggtattcccgtcggtatccaccaggaagaaggcgtttccgccgccgaggtcatc
atgacccagttgcacgcgggcggtaagttcgacagcaactcgtacaaggtgtccggcggt
ctgcacggcgtgggcgtttcggttgtgaacgcgctttccgattggctggaactgcgcatc
tggcgcgaaggcaaggaacacgtcgcgcgctttgaaggcggtttcaccaccaaacaccta
gaggtcgtgggccccaccgaacgtaccggcaccgaagtccggttcatggcctcgaccgag
acattttcgaacctcgattatagcttcgagacgctggaaaaacgtctgcgcgaactggcg
ttcctgaactccggcgtgcgcatcatcctgaccgatgagcgccctgccgaacctctgcgg
accgagcttttctatgaaggcggcgtgaaggaattcgtgaaatacctcgaccggtcgaaa
acctctgtcatgcccgaaccgattttcatctcgggcgagaaagacgatatcggcgtcgaa
gtcgcgatgtggtggaacgacagctaccatgaaaacgtgctgccctttaccaacaacatc
ccgcagcgtgacggcggcacccacaccgcgggcttccgcggggcgctgacgcggacgatc
aacaactacgcgcagtcctcgggtatcgcgaagaaggaaaaagtatccttcaccggggat
gacgcccgcgaaggcctgacctgcgtgctgtcggtcaaggtgcccgaccccaagttcagc
tcgcagaccaaggacaagcttgtcagctccgaagtgcgccccgccgttgaaggcctggtg
aacgaaaagctggcggaatggtttgaagaaaacccgcagattgccaagatcgtcgtcggc
aagatcatcgaagccgcccacgcccgcgaagcggcgcgtaaggcccgcgacctgacccgc
cgcaagaccgcgatggacgtgaacttccttgcgggcaagctcaaggattgctctgaaaaa
gacccgtccaaaaccgaagtctttctggtggagggtgactccgccggtggctctgcgcaa
acgggccgtgaccgccagacacaggcgatcttgcccctgaaaggtaagatcctgaacgtc
gaacgcgcccggtttgaccggatgctgggcagtcaggaaatcggcaaccttgttatggcg
ctcggcaccggaattggtcgcgatgaattcaacatcgataaactgcgctaccacaagatt
gtcatcatgaccgatgcggatgttgacggcgcgcacatccgcacgctgctgctcacgttc
ttctaccgtcagatgccgcagctgatcgagaacggccacctctatatcgcgcagccgccc
ttgtacaaagtgtcgcgtggcaagtccgaggtctacctcaaggatcaggccgcgatggag
gactacctgatccagcaaggcattgaaggcgctatgctaaaacagggcaatggcgaggaa
atcaccggtcaggatctggcccgcgttgtcgatctggcccgccagatgcgtcgtgttctc
gaagctttcccgacccattacccccgtcatattctggaacaggccgccatcgccggtgcc
tttgtgccgggcgcggttgatgctgatctgcaaggcgtggccgacaaggtcgcagagcgt
ctgaacctgatcgcattggaatgggaacgtggctggcaaggccgcatcacccaagaccac
ggcgtccgcctcgcccgcatcctgcgcggcgtggaagaggtgcgcaccctcgacggtcgc
atgctgcggtcgggcgaggccaaacgctcgggcgggttcacagagcatctgcaagacgtc
tacggcacgcccgccaaactggttcgcaaagaccgtagccagctgatccacggccccatg
gacctgcttgaagcgatccttgccgaaggtgaaaaaggcctgtccctgcaacgctacaaa
ggtctgggcgaaatgaaccccgaccagctgtgggaaactacgctcgaccccgacgcccgc
accctgttgcaggttaaggtcgcggatatggccgaagcagacgacctgttcaccaagctg
atgggcgacgtcgtagaaccccgccgcgaattcatccagcaaaacgcgctcagcgtcgag
aacctggatttttag
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