Sulfitobacter sp. PM12: AADW22_00470
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Entry
AADW22_00470 CDS
T10826
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sulp Sulfitobacter sp. PM12
Brite
KEGG Orthology (KO) [BR:
sulp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sulp03016
]
AADW22_00470 (truB)
Enzymes [BR:
sulp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AADW22_00470 (truB)
Transfer RNA biogenesis [BR:
sulp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AADW22_00470 (truB)
Prokaryotic type
AADW22_00470 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
XKW78914
LinkDB
All DBs
Position
102388..103305
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AA seq
305 aa
AA seq
DB search
MGRRRKGRDISGWLVVDKPAGPTSTTVVNKVRWALNANKAGHAGTLDPEATGVLAIALGE
ATKTVPFITDAMKAYEFTVRLGIATNTDDAEGEVIATSELRPDDDAIKDALGKFIGDIQQ
VPPQFSAVKIDGQRAYKLARDGETMELAARPLFVEHLLLVDRPDADHVTLEMVCGKGGYV
RSIARDLGQALGCLGHVRELRRIWSGPFEASEGLTLAQIEEMARTDALDAHLLPLEQGLQ
DLPEVKATPEGATRLRNGNPGMVIAHDVEYGDEVWASFEGRAVAVGRFKAGELHPSRVFN
QPGSV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcaggcgcaagggacgggatatttcgggatggttggtggtggacaagcccgct
ggcccgacctctacgaccgtggtgaacaaggtccgttgggcgctgaacgcgaataaggcg
ggccatgcgggcacccttgatcccgaggccaccggcgttctggcgatcgcgcttggcgag
gcgaccaagacggtgccctttatcacggacgcgatgaaagcctatgagtttacggtccgc
cttgggatcgcgacaaataccgatgatgccgagggcgaggtcatcgcaacatcggagctg
cggcccgatgacgacgcgatcaaggatgctttgggcaagtttatcggtgacatccaacag
gtgccgccgcagttttccgctgtgaagatcgacggccagcgcgcctataaactggcgcgc
gacggtgaaacgatggagctggcagcccgcccgctttttgtcgaacacctactgctggtg
gaccgccccgacgccgaccacgtgacgttggagatggtgtgcggcaagggcggctatgtc
cggtcgattgcgcgcgatctgggacaagccttgggatgtctgggccacgtgcgcgaattg
cgccgtatctggtcgggcccgttcgaggcctctgaagggctgacgctggcgcagatcgaa
gagatggcgcgcacagacgctttggacgcgcatttgctgccgttagagcaagggttgcag
gacctgccagaggtgaaagccacgccggagggggccacccgtctgcgcaacggcaatccc
ggcatggtaatcgcccatgacgttgaatatggcgacgaggtctgggcgtcgtttgagggc
cgcgccgttgctgttgggcgtttcaaggcgggcgaattgcatccgtcgcgtgtgttcaac
cagcccggttctgtgtga
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