Sulfitobacter sp. PM12: AADW22_00495
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Entry
AADW22_00495 CDS
T10826
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sulp Sulfitobacter sp. PM12
Pathway
sulp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sulp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AADW22_00495 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sulp03019
]
AADW22_00495 (pnp)
03016 Transfer RNA biogenesis [BR:
sulp03016
]
AADW22_00495 (pnp)
Enzymes [BR:
sulp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AADW22_00495 (pnp)
Messenger RNA biogenesis [BR:
sulp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AADW22_00495 (pnp)
Transfer RNA biogenesis [BR:
sulp03016
]
Prokaryotic type
tRNA degradation factors
AADW22_00495 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
XKW78919
LinkDB
All DBs
Position
106118..108253
Genome browser
AA seq
711 aa
AA seq
DB search
MFNVTKKSMQWGEETLTLETGKVARQADGSVIATLGETSVMANVTFARQQKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFRGPIGACRVGFEDGDYVLNPTVDDMQDLRLNPDQR
LDLVVAGTKEAVMMVESEAYELSEEEMLGAVKFAHEQIQPVIDLIIDLAEDAAKEPFDFQ
PVDYSDLSAAVKAAGEDAMRAAFAIADKQERTAAVAAARETIKAALTEEQLEDANLGSAL
KGLEASILRGDVVKTGKRIDGRKTDEIRDIVAETGILPRTHGSSLFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFMLHYNFPPYSVGEVGRVGGPGRREIGHGKLAWRALQAVLPA
STDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLILEEDGSYA
ILSDILGDEDHLGDMDFKVAGTEAGITSLQMDIKIAGITPEIMEKALAQAKAGRVHILGE
MNKAISGAGEFSVHAPRIETMQIPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASPNGDSIKKAYDMIWSIVAEPEEGAVYTGTVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQETGEEIKKEEGGEA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgtaacgaaaaaatccatgcagtggggcgaagagacgctgacactggaaact
ggcaaagtggcccgtcaggcagacggttcggtgattgcgacactgggcgaaaccagcgtc
atggcgaacgtcacctttgcgcgccagcaaaaacccggtcaggacttctttccgctgacc
gtccactaccaagagaaatactatgccgccggtaaagtaccgggtggcttcttcaagcgt
gaggcccgccccaccgagaaggaaaccctgacagcccgtctgatcgaccgtccgatccgt
ccgctgttcgttcccggcttcaaaaacgaagttctggtgatgtgtaccgttctcagccac
gatctggttaacgatcccgacatggtcgccatgatcgctgcctccgcagcgctgaccatt
tccggcgcgccgttccgcggtccgatcggtgcctgccgcgttggtttcgaggatggcgat
tacgttctgaacccgaccgtcgacgacatgcaggacctgcgcctgaaccctgatcaacgt
cttgatctggttgtcgccggcaccaaagaagccgtgatgatggttgaatccgaagcctat
gagctgtcggaagaagaaatgctgggtgcggtgaaattcgcgcacgagcagatccagcct
gttatcgacctgatcatcgatctggccgaagacgctgcgaaagagccgtttgacttccag
ccggttgactattcggacctgtccgctgctgtcaaagccgctggcgaagacgccatgcgc
gccgcctttgcaatcgccgacaagcaagagcgcaccgccgctgttgccgctgcccgcgaa
acaatcaaagccgcgctgaccgaagagcaactggaagacgcgaacctcgggtccgctctg
aaaggcctcgaagcgtccatcctgcgtggggacgtggttaaaaccggtaagcgtatcgac
ggccgtaagaccgacgaaatccgcgacatcgtggccgaaaccggcatcctgccccgtaca
cacgggtcgtcgctgttcacacgtggcgaaacacagggtctggttgtgaccactttgggc
accggcgatgacgaacagttcatcgatgcgctgcacggcaacttcaaatccaacttcatg
ctgcactataacttcccgccctattcggttggtgaagttggccgtgtcggtggccccggc
cgtcgcgaaatcggtcacggcaagttggcttggcgtgcgttgcaggcggttctgcctgcc
tccaccgacttcccctacaccatccgcgttgtgtccgagatcactgaatcgaacggctcc
agctcgatggcgtcggtttgcggtggctccttgtccatgatggacgcaggtgtgccattg
aaagcgcccgtcgcgggtgttgccatgggtctgatcctggaagaagacggctcctatgcg
atcctgtccgacatcttgggtgacgaagaccaccttggcgacatggactttaaagtggcc
ggtaccgaagcaggtatcacgtcgctgcagatggacatcaagatcgccggcatcacgccc
gagatcatggagaaagctctggcacaagccaaagcgggccgtgtgcacattctaggcgag
atgaacaaagccatctccggcgcgggtgaattctctgtccacgcccctcgcatcgaaacg
atgcagatcccaaccgacaagatccgtgaagtgatcgggtccggcggtaaagtgatccgc
gagatcgttgaagtgtccggcgcgaaagtcgacatcaacgacgaaggcatcatcaagatc
gcatcgccaaacggcgactcgatcaagaaagcctatgacatgatctggtccatcgtggcc
gagcctgaagaaggtgcggtttacaccggtaccgtcgtcaagatcgttgatttcggtgcc
ttcgtgaacttctttggcaagcgcgacggtctggtacacgtatcccagatcgaaaaccgc
cgcctgaaccacccttcggatgttctgaaagaaggtcaggaagtgaaagtgaagctgctt
ggctttgacgatcgcggcaaggtgcgcctgtcgatgaaagttgtcgatcaggaaaccggc
gaagaaatcaagaaagaggaaggcggcgaagcgtaa
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