Sulfitobacter sp. PM12: AADW22_01115
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Entry
AADW22_01115 CDS
T10826
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sulp Sulfitobacter sp. PM12
Pathway
sulp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sulp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AADW22_01115 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sulp03019
]
AADW22_01115 (recQ)
03400 DNA repair and recombination proteins [BR:
sulp03400
]
AADW22_01115 (recQ)
Enzymes [BR:
sulp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AADW22_01115 (recQ)
Messenger RNA biogenesis [BR:
sulp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AADW22_01115 (recQ)
DNA repair and recombination proteins [BR:
sulp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AADW22_01115 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
XKW79040
LinkDB
All DBs
Position
complement(239251..241296)
Genome browser
AA seq
681 aa
AA seq
DB search
MSGAATLLRDVFGFDGFRPGQQEIVEAVTAGENTLAIMPTGGGKSLCFQMPALLRDGVTV
VISPLIALMRDQVRALQELGVGAGALTSGNTPEETDAVWEGLEAGTLKLLYMAPERLAAG
SVTGMLKRVGVSLIAVDEAHCVSQWGHDFRPDYLRIGELRRTLDVPLAAFTATADTETQA
EIVQKLFDGVPPRAFLRGFDRPNIHLAFAAKNGPRAQILNFASGRRGQSGIVYCGTRAKT
EGLAKALRDDGHLALHYHGGMEADDRRTAERRFQQEDGLIVVATVAFGMGIDKPDIRWVA
HADLPKSIEAYYQEIGRAGRDGAPAETLTLFGPDDIRLRRSQIDEGLAPPERRAADHARL
NALLGLAEALACRRANLLKYFDETDVTCGNCDLCDTPVDVFDGTTAVRKALSAMLRTEEW
FGAGHLIDILLGNETDKIRERGHSDLPTYGVGKEYDKREWQAVFRQMMGHDLVRPDAARH
GALRMTDAALPILRGEASISLRRDSIRAAASQRRPAVKAMVSDEDAPLLSALKAKRRGLA
EAAKVPAYIIFNDRTLIEMAEQRPDTLDAMARIGGVGAKKLENFGDAFLEVINGAAAEMH
PTRRKLAGRAAGSVFDQLREVQTTLSRGADGGEKPLSCSTSLLAKVAQLHAPNLDAIERI
LGEKRTERFGPAFLDVLQQAG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcgctgccacgctacttcgtgatgtctttggatttgacgggttccgccccggc
cagcaagagatcgtagaggccgttaccgccggcgaaaacacattggccatcatgcccacg
ggtggtggtaaatctctttgtttccaaatgcctgcacttttgcgcgacggggtgacggtg
gtgatatcgccgttgattgccctgatgcgcgatcaggtccgcgcgctgcaagagcttggc
gtcggggcgggggcgctgacctctggaaacacgccagaggaaaccgatgccgtgtgggaa
gggcttgaggccggaacgctcaagctgctctatatggcccccgaacggctcgctgcgggg
tcggttacgggcatgctcaaacgggttggcgtatcgctgatcgccgtggacgaggcgcat
tgcgtcagtcagtggggccatgatttccgccccgattacctgcgcatcggcgaattgcgt
cgtacgcttgacgttccgctggccgcgttcaccgcaacggcggacacggaaacccaagcc
gagatcgttcagaaactattcgacggtgtccccccgcgcgccttcctgcgcgggttcgac
cggcccaatatccatctggcttttgcggccaaaaacgggccgcgcgcgcagatactgaac
tttgcgtcagggcgtagggggcagtcgggcatcgtctattgcggaacgcgggccaagacc
gaagggctggccaaagcgttgcgcgacgacggacatctggcactgcattatcatggcggg
atggaggcggacgaccgccgcaccgccgaacgccgtttccagcaggaagacgggctgatt
gtggtggcgacagtggcctttggcatgggcatcgacaagccggatatccgctgggtggcc
cacgccgatctgccgaaatccatcgaagcctactatcaagaaatcgggcgggcgggtcgc
gatggtgcgccggccgagacgctgacgttgttcggccctgatgatatccgtttgcgccgc
agccagatcgacgaagggctcgccccgcccgaacggcgcgccgctgatcatgcacggctg
aacgcgctgctggggctggccgaagcattggcgtgtcgccgtgcgaacctgttgaaatac
tttgatgaaaccgatgtcacctgtggcaattgcgacctttgcgatacacctgtcgatgtg
tttgacgggaccaccgccgtgcgcaaggcgctgtcggcgatgctgcgcaccgaggaatgg
tttggcgcaggtcatctgatcgatatcctgttgggcaatgaaaccgataaaatccgtgaa
cgcgggcacagcgatttaccgacctatggcgtgggcaaggaatatgacaaacgcgaatgg
caggcggtgttccggcaaatgatggggcacgatctggtgcgccccgatgccgcacgtcac
ggtgcgctgcgcatgaccgatgccgcattgccaattctgcgcggtgaggcgtcgatctct
ctgcgtcgggacagtatccgcgccgccgcatcgcagcgccgtcctgcggtcaaggcgatg
gtcagcgacgaggatgcgccgctgctctctgcgctcaaggcgaaacgacgcgggcttgca
gaagccgccaaagtgcccgcctatatcatctttaacgaccgcaccctgatcgagatggcc
gagcaacgcccggatacactggacgctatggcccgtatcggcggggtgggggccaaaaag
ctcgagaattttggcgatgcgtttctagaggtgatcaacggggccgccgccgagatgcac
ccgacgcggcgcaagctggcggggcgcgcggcaggatcggtgttcgatcaactccgcgaa
gtgcaaaccaccttgtctcgtggggcggatggcggcgaaaaaccgttgagctgctcgacc
tcgctgctggcaaaagtggcgcagctgcacgcgccgaaccttgatgccatcgaacgcatt
ttgggcgagaaacgcaccgaaaggtttggccccgcatttctggacgtattgcaacaagcg
ggctag
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