Sulfitobacter sp. PM12: AADW22_03340
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Entry
AADW22_03340 CDS
T10826
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sulp Sulfitobacter sp. PM12
Pathway
sulp03018
RNA degradation
Brite
Enzymes [BR:
sulp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AADW22_03340
Messenger RNA biogenesis [BR:
sulp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AADW22_03340
Ribosome biogenesis [BR:
sulp03009
]
Prokaryotic type
rRNA helicases
AADW22_03340
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XKW79449
LinkDB
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Position
complement(708542..710737)
Genome browser
AA seq
731 aa
AA seq
DB search
MIQTIADALATQGYDSLTPVQEAVTNPDLVEADLLVSAQTGSGKTVAFGLAIAPTLLGDD
EKFGHAGAPLALIIAPTRELAMQVSRELTWLYGKAGAVVTTCVGGMDTRTERRALDRGAH
IVVATPGRLCDHIKRNNINLSDIRAVVLDEADEMLDLGFREELEFILSEAPEERRTLLFS
ATVPAAIAKLAKSYQRDAQRVETVGEKKQHADIEYRALNVHPRDTENAIINVLRFYEAKN
AIVFCNTRAAVARLTTRFTNRGFSVVALSGELTQSERTNALQALRDGRARVCIATDVAAR
GIDLPNLELVVHADLPSNSDTLLHRSGRTGRAGRKGVSALIVPAKMRSKANRLLGGAKLK
VEWANPPSAEEVNAEDEKRLLADSAWSDPIPDDAAGFVANLVEQFSAEQLATAFVNLYRA
RQSAPEQLAEPGTPADERPRGDFGPSVWFSISIGRNDDAEPRTILPMICRMGDLTKDDVG
AIRVQPSHTFVEILATSADKFTNALGPDMKVEDGAVVTKLDKAPDLSRGPKPGGRGPKPN
RGGPRSDNGPRPDRGPRPDRAPYDPDAPRAPRKPRAASTEEASVTYDKPRGPRPDKGFDK
PRGDKPKFDKPKAPKGERPPKSHKTERSPMKPGATPKPKSAGKPDSFDKPGGKPKAKAVW
KKEKPADRGADRPRGDGKPADKPFKARAADPSKRFVPPGKLGAKPKGGKPSGKAGGGDAA
PKRGKSSFRPK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
ttgatccaaaccatcgcagacgcgcttgccacccaaggctatgattcgcttacccccgtc
caagaggcggttaccaacccagatctggtcgaagccgaccttctggtgtcagcccaaacg
gggtccggcaagacagtggcctttggtctggccatcgcaccgacccttttgggcgatgat
gaaaaattcggacacgccggcgcgcccctcgcgctgatcatcgcaccgacgcgcgaattg
gccatgcaggtcagccgcgagctgacgtggctttatggcaaggccggtgcggtcgtgacc
acctgcgttggcggcatggacacacgcaccgaacgtcgtgcgctggaccgtggcgcgcat
atcgtcgtcgcgacaccgggccgcctgtgcgaccacatcaaacgcaacaacatcaacctg
tccgacattcgtgccgtggtgctggatgaagcggacgagatgcttgatctgggtttccgc
gaagagctggaattcatcctctccgaagcgccggaagagcgccgcacactgttgttctcg
gccaccgtgcctgcggcgatcgccaagctggccaaatcctaccagcgtgatgcgcagcgc
gtcgaaaccgtgggcgaaaagaaacaacacgccgacatcgaataccgtgcgctgaacgtg
cacccgcgcgacactgaaaacgcgatcatcaacgtactgcgcttttacgaggcgaaaaac
gccatcgtcttctgcaacacccgcgccgccgtcgcacgcctgaccacccgctttaccaac
cgcggcttttcagtcgtggcgctgtcgggcgagctgacgcaatccgaacgcaccaacgcg
ctgcaagcgctgcgcgacgggcgcgcgcgcgtctgtatcgcgacagatgttgccgcacgc
gggatcgacctgcccaacctcgaactggtggtgcatgccgatctgccgtcgaactctgac
acgttgctgcaccgctcgggccgtaccggtcgtgccggtcgcaagggtgtgtccgcgctg
atcgttcccgccaagatgcgcagcaaggcaaaccgtctgctgggcggtgccaagctgaag
gtcgaatgggccaacccgccctctgctgaagaagtgaacgccgaagacgaaaagcgtttg
ctggccgattccgcatggtctgatccgatccccgatgacgcagcgggctttgttgccaat
ctggtcgaacagttcagcgccgagcaactggcgacggcctttgtgaacctgtaccgtgca
cgccagtccgcgcccgagcagctggcagagcccggcacccctgccgacgaacgcccccgt
ggcgactttggcccgtcggtctggttctcgatctcgatcggacgcaatgatgacgccgaa
ccccgcaccatcctgccgatgatctgtcgcatgggcgatctgaccaaggatgacgtgggc
gcgatccgcgtgcagcccagccatacctttgtcgaaatcctcgcgacctcggcagataaa
ttcaccaacgcgcttggccccgacatgaaggtcgaagacggcgcggttgtgaccaagctg
gacaaggcccccgatctgtcgcgcgggcccaagcccggcggccgtggccccaaaccgaac
cgtggcggcccccgttccgacaacggcccgcgtcccgatcgtggcccacgccccgaccgc
gcaccctatgaccccgacgcaccacgtgcaccgcgcaaaccacgtgcggccagcaccgaa
gaagcatcggttacctacgacaaacctcgcggcccgcgccccgacaaagggttcgacaaa
cctcgcggcgacaaaccgaagtttgacaagcccaaagcccccaaaggcgaacgcccgccc
aagtcgcacaagaccgaacggtctccgatgaagcccggtgccacgcctaaacccaagtct
gcgggcaagcctgacagcttcgacaaacccggcggcaagcccaaagccaaagccgtctgg
aaaaaggaaaagccagcggatcgtggggcggaccgcccccgtggcgacggcaaaccagcg
gataaaccgttcaaggcccgcgccgctgacccgtcgaaacgctttgtcccaccgggcaaa
ctgggcgcgaaacccaagggtggcaaaccttcgggcaaagccggtggcggcgatgcagcc
cccaaacgcggcaagtcgagctttcgcccgaaataa
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