Sulfitobacter sp. PM12: AADW22_07085
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Entry
AADW22_07085 CDS
T10826
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sulp Sulfitobacter sp. PM12
Pathway
sulp03410
Base excision repair
sulp03430
Mismatch repair
sulp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sulp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AADW22_07085 (recJ)
03430 Mismatch repair
AADW22_07085 (recJ)
03440 Homologous recombination
AADW22_07085 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulp03400
]
AADW22_07085 (recJ)
DNA repair and recombination proteins [BR:
sulp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AADW22_07085 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AADW22_07085 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AADW22_07085 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF7281
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
XKW80167
LinkDB
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Position
complement(1482856..1484595)
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AA seq
579 aa
AA seq
DB search
MSFLGVDASLTGRRWVGPGVEVERATEVLVQQTSLPLALCQVLARRGVAAEEAEAFLAPS
LRDLLPDPRSLRDMEKAATRFLAAVKARQRIAVFADYDVDGGSSAALLLVWLREMGCAAT
LYVPDRIDEGYGPNDAAMAELAAAHDLIVCVDCGTLSHGPVAAAVGADVVILDHHLGGET
LPDALAVVNPNRQDEDGALAHLCAAAVVFLMLVEAGRQLREAGTHGPDLMALLDLVGLAT
VADVAPLIGVNRAFVRQGLRVMARRDRLGLAALADVARMDTAPAAYHLGFLLGPRINAGG
RIGQADLGARLLACDDPHEAQSLAEKLDLLNTERRDVETAVRAAALDQAEARGFDAPLVW
ASGAGWHPGVVGIVASRLKEASNRPSIVIGFEDGIGKGSGRSVSGIDLGAPIQRLAAEGL
LIKGGGHKMAAGLTVAEDKLDAAMARLSELLAKQGAHLAGAADLKLDGMLMPAAATVELA
QQVEQAGPFGAGAPAPRYAFADMQIRFAKRVGESHLKISFGDGNNTKMDAIAFGAFDGPL
GPALENHGGARFHLAGRLDINTWRGRQSVQLRLEDAAPA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagctttctaggtgttgatgcgtctttaacggggcgtcgctgggttggccccggtgtc
gaggtggaacgcgcgaccgaagttctggtgcagcagaccagcctgccgctggccctgtgt
caggtgctggcgcggcgcggtgtggcggcggaagaggccgaagcgtttcttgcgccgtcg
ttgcgcgatctgctgcctgacccgcgttccctgcgcgacatggaaaaagccgcgacgcgt
tttcttgctgcggtcaaagcacgtcagcggattgccgtttttgcggattatgacgtggat
ggtggcagctctgccgcgctgctgctggtctggctgcgcgagatgggctgcgccgcgacg
ctttatgtaccggaccggatcgacgaaggatatggccccaacgacgccgcaatggccgaa
ctggccgcggcccatgatctgatcgtctgcgttgactgcgggaccttgtctcatgggccg
gtggccgcggcggtaggcgcggatgtcgttattctggaccaccacctgggcggagagacc
ctgcccgacgccttggccgtggtgaaccccaaccggcaggatgaagacggtgccttggcg
catctttgtgccgcggcagtggtgttcttgatgctggtcgaggcagggcgccaactgcgc
gaagcgggcacacacgggcctgacctgatggcgctgttggatctggtggggctggccacg
gtggccgatgtcgccccgttgatcggcgtgaaccgcgcctttgtacgtcaggggctacgc
gtcatggcgcggcgcgacagattggggcttgccgccttggccgatgtggcgcggatggat
acggccccggcggcctatcatcttgggtttctgcttggcccgcggatcaacgcgggcggg
cgcatcgggcaagcggatctgggggcaaggctgctggcctgcgatgatccccatgaggcg
cagtcgcttgccgaaaagctggacctgctgaacaccgagcgccgcgatgttgaaaccgcc
gttcgcgccgccgcgctggatcaggcagaggcccgcggctttgacgcgcctttggtctgg
gcctcgggcgcgggctggcatccgggcgtggtgggcatcgtcgcctcgcgtttgaaagag
gcgtcgaaccggccgtcgatcgtgatcgggttcgaggatggcatcggcaaaggctctggc
cgctctgtctcggggatcgatctgggcgcgccgatccagcggctggcagccgaggggcta
ctgatcaagggcggcggacataaaatggccgccgggctgaccgtggccgaagacaagctg
gacgccgccatggcgcggctgtcagagctactggccaagcagggcgcgcatctggctggc
gcggcagacctgaagctggacggcatgttgatgcccgccgccgcgacggtggaactggcg
cagcaggtggaacaggcaggccccttcggggccggtgcccctgccccgcgatatgccttt
gccgacatgcagatacgctttgccaagcgggtgggtgaaagccacctcaagatcagtttc
ggcgacggcaacaacaccaaaatggacgccatcgcctttggtgcatttgacggcccgctt
ggcccggcactggaaaaccacggtggtgcacggttccatctggcgggccgtctggacatc
aatacgtggcgcggccgacagtctgtgcagctgcgtctggaagatgcggcacctgcgtaa
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