Sulfitobacter sp. PM12: AADW22_10645
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Entry
AADW22_10645 CDS
T10826
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sulp Sulfitobacter sp. PM12
Pathway
sulp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sulp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AADW22_10645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sulp03019
]
AADW22_10645
Enzymes [BR:
sulp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AADW22_10645
Messenger RNA biogenesis [BR:
sulp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AADW22_10645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_RecD
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
XKW78034
LinkDB
All DBs
Position
complement(2159058..2160359)
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AA seq
433 aa
AA seq
DB search
MSDFEMMGLPRRLVKALTNMGMTDPTPIQKQAIPHGMNGRDVMGLAQTGTGKTAAFGIPL
VAQMLEREARPEPRTVRGLVLAPTRELANQIMENLKGFCEGTQLKTMMIVGGQSINPQIK
RMERGVDLLVATPGRLLDLMDRRAVLLHKTTFLVLDEADQMLDMGFIHDLRKIAAVLPKE
RQTMLFSATMPKLMNEIANSYLNSPIRIEVSPPGKAADKITQEVHFIAKAEKKSLLIELL
GKHTEERALVFGRTKHGCEKLMKDLVKAGFKAASIHGNKSQGQRDRAIESFKKGEVTVLV
ATDVAARGLDIPDVKHVYNYELPNVPDNYVHRIGRTARAGKDGAAIAFCAPDEMGELKDI
QKTMKISIPVASGRPWEAIDEPAKPKGRGGRGRGRGGRPGGGGGNGGGGNGGGAGKPAGA
ARRRRKPAGQRAA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttgaaatgatgggcctgccgcgccgtctggtcaaagccttgaccaacatg
ggcatgaccgatccgaccccgatccagaaacaggcgatcccccacgggatgaatggccgc
gacgtgatggggctggcacagaccggcaccggcaagaccgctgccttcggtatcccgctg
gtggcccagatgctggaacgcgaagcccgccccgagccgcgcaccgtgcgcgggttggtg
ctggccccgacccgcgagctggccaaccagatcatggagaacctcaaggggttctgcgaa
gggacccagctgaaaaccatgatgattgtcggcggccagtcgatcaacccgcagatcaaa
cggatggagcgcggcgtcgacctgctggtggccacacccgggcgcttgctggacctgatg
gaccgccgcgcggtgctgctgcacaaaaccacgttccttgtgctggatgaagcagaccag
atgctcgacatgggcttcatccacgatctgcgcaagatcgcggcggtgctgccgaaagag
cgtcagacgatgctcttttcggcaaccatgccgaaactgatgaacgagatcgccaacagc
tacctcaacagcccgatccgcatcgaagtctcgcctccgggcaaggcggcggacaagatc
acccaagaggtgcatttcatcgccaaggcggaaaagaaatccctgctgatcgaactgctt
ggcaagcacaccgaggaacgcgccctggtgttcgggcggaccaaacacggctgtgaaaaa
ctgatgaaagatttggtcaaagccggtttcaaagccgcctcgatccatggcaacaaaagc
cagggtcagcgggaccgcgccatcgaatccttcaagaaaggcgaggtcaccgtgcttgta
gcaacggatgtcgccgcccgcggtctggatattcccgacgtgaagcacgtctacaactac
gagctgcccaatgtgcccgacaattatgtccatcgtatcggccggaccgcgcgcgcgggc
aaagacggggcggcgatcgctttctgcgcaccggatgaaatgggcgagctgaaagatatc
cagaagacgatgaaaatctcgatccccgtggcctccggccgtccgtgggaagcgattgac
gaacccgccaagccaaagggtcgcggcggacgcggtcgtggtcgcggtggtcgccccggt
ggcggtggcggcaacgggggcggtggcaatggcggcggtgcgggtaaacccgccggtgcc
gcgcggcgtcgtcgcaagccagccgggcagcgcgccgcataa
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