Sulfitobacter sp. OXR-159: T8A63_00370
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Entry
T8A63_00370 CDS
T11487
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sulq Sulfitobacter sp. OXR-159
Pathway
sulq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sulq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T8A63_00370 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulq03021
]
T8A63_00370 (rho)
03019 Messenger RNA biogenesis [BR:
sulq03019
]
T8A63_00370 (rho)
Transcription machinery [BR:
sulq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
T8A63_00370 (rho)
Messenger RNA biogenesis [BR:
sulq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
T8A63_00370 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
ATPase_2
NACHT
OB_RNB
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WPZ29551
LinkDB
All DBs
Position
complement(81686..82957)
Genome browser
AA seq
423 aa
AA seq
DB search
MTTETLNLADLKAQTPKNLLAMAEELEIENASTMRKGEMMFQILRERADDGWEISGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRKWSLRTGDTIEGLIKAPDDTERYFALTE
VTKINFEAPEKARHKVAFENLTPLYPDERLTMEVDDPTIKDRSARIIDLVSPIGKGQRSL
IVAPPRTGKTVLLQNIANSIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
ATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKIADKRVF
PAIDILKSGTRKEDLLVDKVDLQKTFVLRRILNPMGTTDAIEFLLGKLKQTKSNSDFFDS
MNT
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgaaacgctgaacctcgctgatctcaaggcgcagacgccgaaaaacctgctc
gccatggccgaagagctggaaatcgaaaacgcctcgaccatgcgtaaaggcgagatgatg
ttccaaattcttcgcgaacgcgcggatgacggttgggagatctcgggcgatggcgtcttg
gaagtgctgcaagacggattcggtttcctgcgctcgcccgaagcgaactatctgccgggc
cccgatgacatctatgtctcgcccgacatgatccgcaaatggtcgctgcgtaccggggac
accatcgaggggctgatcaaggcgcccgacgacaccgaacgctatttcgcgctgaccgaa
gtgaccaagatcaactttgaggcgcctgagaaggcccgccataaggttgcttttgaaaac
ctgacgccgctctaccctgacgagcgcctgacgatggaggtcgatgaccccactatcaaa
gaccgctccgcgcggatcatcgacctcgtgtcgcccatcggtaagggtcagcgttcgctg
atcgtcgccccgccgcgcaccggtaagaccgtgctgctgcaaaacatcgccaatagcatc
gaaaagaaccacccagagtgctatctcatcgtcttgctgatcgacgaacggcccgaggaa
gtcaccgacatgcagcgttcggtaaagggggaggtcgtttcctccactttcgacgaacct
gcaacgcgccacgtggccgtgtccgagatggtgatcgagaaagccaagcgtcttgtcgaa
cacaagcgcgacgtggtgatcttgctcgattcgatcacccgtctgggccgcgcgttcaac
accgtggtgccatcttcgggtaaggttctgaccggtggtgtcgacgcaaacgccctgcag
cgcccaaaacgcttcttcggtgccgcacggaacattgaagagggcggatcgctcaccatc
atcgcgaccgcgctgatcgacaccggcagccgcatggacgaagtgatctttgaagagttc
aaaggtaccggcaactccgaaatcgtgctggaccgcaagatcgccgacaagcgcgtcttc
ccggcgatcgacatcctcaaatccggcacccggaaagaggatttgctggtcgataaagtg
gacttgcaaaagacctttgtcctgcgccgcattctcaacccgatggggaccaccgacgcc
atcgagttcctgctcggcaaactcaagcagaccaagtcgaattctgacttcttcgactcc
atgaacacctga
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