Sulfitobacter sp. OXR-159: T8A63_02685
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Entry
T8A63_02685 CDS
T11487
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sulq Sulfitobacter sp. OXR-159
Pathway
sulq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sulq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
T8A63_02685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulq03021
]
T8A63_02685
03400 DNA repair and recombination proteins [BR:
sulq03400
]
T8A63_02685
Enzymes [BR:
sulq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
T8A63_02685
Transcription machinery [BR:
sulq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
T8A63_02685
DNA repair and recombination proteins [BR:
sulq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
T8A63_02685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WPZ29980
LinkDB
All DBs
Position
546711..547727
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPQQLDVKPGNDPARQATVMAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSLRMEVEGPKRLSISAKGPGVVTAGDISE
SAGIEILNREHVICHLDDGADVYMELTVNTGKGYVSADKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSITPDDAVAFAARILQDQLGIFVNFDEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPENIEDLAKKFEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaattgggctgaattgatcaagccgcaacagcttgacgtcaagccgggc
aacgaccccgcacgtcaggcgaccgtcatggccgaaccgctggagcggggctttggcctg
accctcggcaacgcgctgcgccgcgtgctgatgtcctcgctgcagggcgcggcgatcaca
tctgtgcagatcgacaacgtactgcacgagttttcctccgtcgccggtgtgcgcgaagac
gtgaccgacatcatcctgaacctcaagggcgtcagcctgcgcatggaagtcgaaggcccc
aaacgcctgtcgatctctgccaaaggtccgggcgttgtgaccgccggtgacatctccgaa
tccgccggtatcgagattctgaaccgcgagcacgtgatctgccacctcgacgatggtgca
gatgtctacatggagctgaccgtcaacaccggcaagggctatgtctccgcagacaagaac
aagccggaagatgcgcccatcggtctgatcccgatcgacgcgatctattcgccggtcaag
aaggtctcctatgacgtgcagcccacccgtgagggccaggtgctggattatgacaagttg
accatgaaagtggaaaccgacggctccatcacgccggatgacgccgtggcctttgccgcg
cgcatcctgcaggaccaactgggcatcttcgtgaacttcgacgagccggaatcggcgtcc
cgtcaggacgacgacgatggtcttgagttcaacccgctgctgctcaagaaagtcgacgag
ttggaactgtctgtgcgttcggcaaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaagaccgaagccgagatgctgcgcaccccgaacttcggccgcaaatcc
ttgaacgagatcaaggaagtgctgtcgggcatgggtctgcaccttggcatggatgtcgaa
gactggccgccagaaaacatcgaagacctcgccaagaagttcgaggattcgttctaa
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