Sulfitobacter sp. OXR-159: T8A63_10235
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Entry
T8A63_10235 CDS
T11487
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sulq Sulfitobacter sp. OXR-159
Pathway
sulq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sulq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T8A63_10235 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulq03400
]
T8A63_10235 (uvrA)
DNA repair and recombination proteins [BR:
sulq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T8A63_10235 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
T8A63_10235 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_25
nSTAND1
DnaJ_CXXCXGXG
AAA_23
BCA_ABC_TP_C
nSTAND3
AAA_21
SCO2_C
Motif
Other DBs
NCBI-ProteinID:
WPZ28039
LinkDB
All DBs
Position
complement(2001624..2004509)
Genome browser
AA seq
961 aa
AA seq
DB search
MAELKNIEVRGAREHNLKNIDVDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLDMMQKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARVGT
PYSPATGKPIEAQQVQDMVDRIMTMEEGTRAYLLAPIIRDRKGEYRKEFIELRKQGFQRV
KVNGEFYDLDEPPTLDKKFRHDIDVVVDRIVVREGLETRLADSLRTALDLADGIAILETA
PSEGEPERHTFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPSCDGLGVELFFDERLVVP
DQNLRIYDGALAPWRKGKSPYFKQTIEAIAKHYNFDQKTRWKDLPEKVQEVFLRGSGKEE
ITFRYDEGGRVYEVKRVFEGVIPNMQRRYRETDSNWVREEFERYQNNRPCGTCGGYRLRP
EALAVRIGPTIGNENELLHIGKVVEMSIREAFDWCKAVPDHLTPQKNEIAKAILKEIRER
LGFLNNVGLEYLTMSRSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDR
LLDTLKNLRDQGNTVIVVEHDEEAIREADYVFDIGPGAGVHGGQVVSHGTPEQVANDPNS
VTGQYLTGVREISVPTKRRKGNKKKLQVVKATGNNLQNVTVDFPLGKFVCVTGVSGGGKS
TLTIETLFKTASMNLNGARQTPAPCQTIKGLEHLDKVIDIDQRPIGRTPRSNPATYTGAF
TPIRDWFAGLPEAKERGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVECETCKG
ARYNRETLEVRFKGKSIADVLDMTVEDAQSFFAAVPSIREKMDALMRVGLGYIKVGQQAT
TLSGGEAQRVKLSKELSKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVDQGNSVVVI
EHNLDVVKTADHIIDIGPEGGDGGGRVVATGTPEKVADVAESHTGKYLKPMLYKQTKVAA
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctgaagaacatcgaagtgcgcggcgcgcgcgagcacaatctaaagaacatc
gacgtggacattccgcgtgatcaactggttgtaattaccgggctttccggctcgggcaag
tcgagccttgccttcgacacgatctatgccgaagggcagcggcgctatgtggaatcactg
tcggcctacgcgcggcagttccttgatatgatgcagaaaccggatgtggatcacatttcc
ggtctcagccctgcgatttcaatcgaacagaagaccacctcaaagaaccctcgatccacc
gtcggcacggtgaccgagatttacgactatctgcggctgttgttcgcccgcgtcggcacc
ccctatagcccggccaccggcaaacccatcgaagcccagcaggtgcaggacatggtcgac
cggatcatgaccatggaagagggcacgcgggcctatctgctggcgccgattattcgcgac
cgcaaaggcgaataccgcaaagagttcattgagttgcgcaagcaaggctttcaacgggtc
aaggtgaacggtgaattctacgatctggatgagccgccgacgttggacaagaaattccgc
catgacattgatgttgtcgtcgaccggatcgtggtgcgcgaagggctggaaacgcgcctg
gcggattcgctgcgcacggcgcttgatcttgccgatgggatcgccattctcgaaaccgcg
cccagtgaaggcgagcccgagcgtcatacgttttcggaaaaatttgcctgccctgtcagt
ggcttcaccattcccgagattgagccgcggctgttctccttcaacgcgccgttcggggct
tgcccctcttgtgatggccttggggtcgagctcttttttgacgagcgtttggtggtgcct
gaccagaacctgagaatctatgacggggccttggcgccttggcgtaaggggaagtccccg
tactttaagcaaaccatcgaagccattgccaagcattataatttcgaccaaaagacccgc
tggaaagacctgcctgagaaggtgcaagaggtgttccttcgtggttccggcaaggaagag
attaccttccgctatgacgaaggcgggcgcgtttatgaggtcaagcgggtgttcgagggg
gtgatccccaatatgcagcgccgctaccgcgaaacggacagcaactgggtccgcgaggag
tttgagcgctatcagaacaaccgcccctgtggcacctgtggtggctatcgcctgcggccc
gaagcgcttgcggtacgcattggccccacgattggcaatgagaacgagttactccacatc
ggtaaggtggtggagatgtcgatccgtgaagcctttgactggtgcaaggcggtgccagac
catctgaccccgcagaagaatgaaatcgcaaaagccattttaaaggaaatccgggaacgt
cttgggtttctgaataacgtgggtcttgagtaccttacgatgtcgcgttcaagtggtact
ttaagtgggggcgagagccagcgtatccgcttggcaagccagattggctctggcctgacg
ggcgtgctttacgtgcttgatgaaccgtcgatcgggctgcatcagcgcgataatgaccga
ttgctggataccttaaagaacctgcgagatcaggggaatacggtgattgttgtagagcat
gacgaagaggccatccgcgaggccgattatgtgttcgacatcgggccgggtgctggagtt
cacggcgggcaagtggtgagccatggcacgcctgaacaggtggcgaatgatcccaattct
gttactggtcagtatcttaccggcgttcgtgaaatctcggtcccgaccaagcggcgcaag
gggaacaagaagaagttgcaggttgtaaaggctactggcaacaacttgcagaatgtcact
gtggatttcccgctgggtaaattcgtctgtgttacgggcgtgtcggggggcggcaagtcc
acccttacgatcgaaaccctgttcaaaaccgcgtcgatgaacctgaacggcgcgcggcag
acacctgcgccttgtcagaccatcaaagggttggaacatcttgacaaggtcattgatatt
gaccagcggcccataggtcggactccgcgttcgaatccggcgacttacaccggggctttc
accccgatccgggactggttcgccggtctgcccgaagccaaagagcgcggctataagccc
gggcgtttctctttcaacgtcaaaggcgggcgttgcgaggcctgtcagggtgacggggtt
atcaagatcgagatgcacttcctccctgatgtttacgtggaatgcgagacctgcaaaggc
gcgcgctataaccgcgagacgctggaggtgcggtttaagggtaagagcatcgccgacgtg
cttgatatgaccgtagaagatgcgcaaagcttctttgccgccgtgccttcgatccgtgaa
aagatggatgcgctgatgcgcgtggggctgggctatatcaaggtcggacagcaggccacg
accctgtcgggcggtgaggcgcagcgggtgaagctcagcaaggagttgagcaaacgttct
accgggcgcacgctatatattcttgatgaaccgacaacgggtttgcatttcgaagacgtg
cgcaagctgttggaagtgctgcacgaattggtcgatcagggcaattccgtggttgtgatt
gagcataacctagatgtggtgaaaaccgccgatcatattatcgatatcggccctgagggt
ggtgacggcggtggccgggttgtggctacagggacgcccgaaaaggtcgcggacgtggcc
gaaagccataccgggaagtacctcaaaccgatgctatataagcagacaaaagtggcggcg
gaataa
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