Candidatus Sulfuricurvum sp. RIFRC-1: B649_08765
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Entry
B649_08765 CDS
T02537
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sulr
Candidatus Sulfuricurvum sp. RIFRC-1
Pathway
sulr03420
Nucleotide excision repair
sulr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sulr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B649_08765
03430 Mismatch repair
B649_08765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulr03400
]
B649_08765
Enzymes [BR:
sulr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B649_08765
DNA repair and recombination proteins [BR:
sulr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B649_08765
MMR (mismatch excision repair)
Other MMR factors
B649_08765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
DEAD
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFV98065
LinkDB
All DBs
Position
complement(1755304..1757382)
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AA seq
692 aa
AA seq
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MPLSRLNVQQYTAATAPYGHNLIIASAGTGKTSTIVGRIAYLISQNVKPEEILLLTFTNK
AAAEMVERVAAFFGREIASKIDAGTFHAVSYRWLKRKEGKVVLKQPRELKTLFRSVYEKR
TFSHIDCATSAYGANYLYDVYSFYQNTELNVNFEEWILTRQDEHAVYAAIYADIIDEFEA
LKKEYGFVNFNDLLLHMRDLAQQSDLGYKEVLIDEYQDTNALQGTLINAMRPPSLFCVGD
YDQSIYAFNGADISIIGSFTTNFPDAEVYTLNKNYRSTVPILSLANTVIAYNERIYPKAL
EVTRTAEAQSPSLLIYDELFDQYHGIAQKIGDSSTNREEIAVIFRNNASADGIEATLREM
GIACRRRGGTSFFDSKEIKALLDMYTLLVNESDMMAFIHLFDYAKGVGSAIAKELFVALQ
KLGRGSFLRGLYSPDSEISNPFEKRRLNHQLGLFDDYAELGSAGRFAKLGLDPNFMGNPI
LKHAKLTKDSATFLHDLFILFRQLRDIKEPKAAVQKIALSALYGHVVEMLSTRRAMTENG
SIDERAKSESQERIRRKCTLLFELSRPYKDHERFLNAMVLGSQDLTQGEGVHLLSIHASK
GLEYQEVYVIDLMDGRFPNRKLMSRSGSIEEERRLFYVSVTRAKDRLFLSYAKYDKIKKT
NFVPSQFLFEAGLIPKDETYNALVSKGSSEEA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
ttgccactttcccgcctcaacgttcaacaatatactgccgcaactgctccgtatggacat
aatcttattatagcttcagccggtacgggaaaaacttcgacgattgttgggcgtattgct
tatcttatctctcaaaatgtaaaacctgaagagattttactccttacttttaccaacaaa
gccgccgctgagatggtggagagggtagcggcatttttcggtcgggagatcgcttctaag
atcgatgccgggacatttcatgcggtgagttatcgctggctcaaacgcaaagagggaaaa
gtcgttctcaaacagcccagagaactcaaaactcttttccgcagtgtgtatgaaaaacgg
acattcagccacattgattgtgcgacatcggcatacggtgccaattatctgtatgatgtg
tattctttttaccaaaatacagaactgaacgttaattttgaagagtggattttaacaagg
caagatgaacacgctgtgtatgcggcgatttatgccgatattattgatgaatttgaagcg
ctgaaaaaagagtatggcttcgtaaattttaatgatttgcttcttcatatgcgtgatctt
gcacagcagagtgatttggggtataaagaggtattgattgacgagtaccaagatacgaat
gcccttcaggggacgctgatcaacgctatgcgccctccgtcacttttttgtgtgggagat
tatgatcagagtatttatgcttttaacggggctgatatctctattattgggtcatttacg
accaatttccccgatgctgaggtctatactcttaataaaaactaccgttcaaccgttccg
atcctctctttggccaatacggttatcgcctataatgaacggatatacccaaaagctttg
gaagtaacccgaacggcagaagcgcaaagcccctccttgcttatctatgatgaactgttt
gaccagtatcatggtattgctcaaaaaatcggtgattcttctacgaatcgagaagaaatc
gctgtaatctttcgaaataatgcctcggcagatggtattgaagcgaccttacgtgaaatg
ggaatagcgtgtcggcggcgcgggggaaccagtttttttgattcgaaagagatcaaagcc
cttttggatatgtatactctgcttgtcaatgaatcggatatgatggcctttatccatttg
tttgattatgccaaaggggtaggaagtgcaattgcaaaagagctgtttgtggcattgcaa
aaactgggtcgcggttcgtttttgcgtggattgtattcaccggattctgaaatctctaac
ccgtttgaaaaacggcgtcttaatcatcagttagggctgttcgatgattatgctgagctt
gggagtgcagggcgatttgcaaagcttggattggaccctaactttatggggaatccgatt
ctgaagcacgctaaactcacaaaagattcggctacctttttgcatgatctatttatttta
ttccgtcaattgagagatatcaaagaaccaaaagctgcggttcaaaagattgcactttca
gcgttatacgggcacgttgttgagatgctttccacaaggcgggctatgaccgaaaatgga
tcgattgatgagcgggctaaaagtgaatcacaagagagaattcgtcgaaaatgcactctt
ttgtttgaactttcacgcccgtataaagatcatgaacgtttcttgaatgccatggttttg
ggctcacaggatttgacgcagggggaaggggttcatctgctcagtattcatgcctccaaa
gggttggaataccaagaagtgtatgtcattgatttaatggatggacggtttccaaaccga
aaactgatgtctcgaagcggaagtattgaagaggagagacgacttttctatgtatcggta
acacgggcaaaagatcgtctctttctgagctatgctaaatatgacaaaatcaagaaaacc
aattttgtcccgtcgcaatttttatttgaggctgggctgattcctaaagatgaaacgtat
aatgctttagtctcaaaagggtcaagtgaagaggcttaa
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