Candidatus Sulfuricurvum sp. RIFRC-1: B649_10220
Help
Entry
B649_10220 CDS
T02537
Name
(GenBank) dead/deah box helicase domain-containing protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sulr
Candidatus Sulfuricurvum sp. RIFRC-1
Pathway
sulr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sulr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B649_10220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sulr03019
]
B649_10220
03009 Ribosome biogenesis [BR:
sulr03009
]
B649_10220
Enzymes [BR:
sulr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B649_10220
Messenger RNA biogenesis [BR:
sulr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B649_10220
Ribosome biogenesis [BR:
sulr03009
]
Prokaryotic type
rRNA helicases
B649_10220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
L_thumb_ring_vir
AAA_22
DEDD_Tnp_IS110
MA3
Motif
Other DBs
NCBI-ProteinID:
AFV98356
LinkDB
All DBs
Position
complement(2040302..2041897)
Genome browser
AA seq
531 aa
AA seq
DB search
MNVIEEAITDENLVTFESFGLRKEIMQSINYAGFKTPSPIQQMVIPVIMEGRDVVGQAHT
GTGKTAAFGLPALNKMHLKGGIEALIITPTRELANQVGDEIFKYGKHLGVRTVTIYGGSS
YNRQMDLIERGAQVIIATPGRLLDMLSRNMLKGFTPSTVILDEADEMLDMGFLDDINEIF
TYLPTERQTLLFSATMPAPIKQLAERILVNPFFASITKSETTNTDITQQYYVIEESERDD
AIIRLMDSEDAKKTVVFCRTKKEVDRLSNVLSAAGYMAKGLHGDMEQRQRESVIKGLKTD
AVDVLIATDVAARGLHIDDVTHVFNYHIPFDPESYVHRIGRTGRAGKKGVAITLVTPMEF
KELQRIRAKVGTTMEHAYIPSKLDVKEAQVTRLVREIEKQHVYDEAHKVLDLLKQDYDQE
QIAYKLISVLMERNTVAGPNNIGIAAERLEKILSNLSNRGDRGGQRSGGFNRNRNGGNRS
GGGGYRGNNDRNAGGGERSGSGERSGGGERGGNDRGERSRSFSGQKPKPRY
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaatagaagaagcaatcacagacgaaaacttggtaacatttgaatctttcggt
cttagaaaagagatcatgcaaagtatcaattatgccggtttcaaaactccaagtccgatc
caacaaatggttattcctgttattatggaagggcgtgacgtcgtaggacaagctcatacc
ggtacaggtaaaacagcggcattcggtcttcctgcattgaataaaatgcatttaaaaggg
ggaattgaagcccttatcatcactccgacacgtgaacttgcgaaccaagtcggtgatgaa
attttcaaatacggtaaacacctcggtgttcgtaccgtaacaatttacggcggaagttcg
tataaccgtcaaatggatctcatcgagcgcggcgcacaagttatcatcgctactccggga
cgattacttgatatgttgagccgtaatatgctcaaaggctttaccccttcaaccgttatt
ttggatgaagcagacgaaatgctcgatatgggctttttggatgatattaatgagattttc
acctatttgccgactgagcgtcaaacattgctcttctcagcaactatgcctgctccgatc
aaacaattggctgagcgtattttggtaaatccattttttgcatcaatcaccaaatctgag
acaacgaacacggatattacgcaacaatattatgttattgaagaatcagaacgtgatgat
gcgattatccgtcttatggactcagaagatgcgaaaaaaaccgttgtattctgccgaacc
aaaaaagaggttgatcgtctctctaatgtcctttcagctgcaggctatatggcaaaagga
ctacatggtgacatggagcaacgtcaacgtgaaagtgttatcaaagggcttaaaaccgat
gcagttgatgtattgatcgcgacagacgttgcggcgcgcggattgcacattgatgacgtt
actcacgttttcaactaccatatcccattcgatcctgagagttatgttcaccgtatcgga
cgtacaggacgtgcgggtaaaaaaggggttgcaattacccttgttactccaatggagttt
aaagaacttcaacgtatccgtgctaaagtcggtaccacaatggaacacgcgtatattcca
agtaaattggatgttaaagaggcgcaagttacccgtttggttcgtgaaattgaaaaacaa
catgtctatgatgaagcgcataaagtgcttgatttgttgaaacaagattacgatcaagaa
caaattgcctataaattgatctctgtattgatggaacgcaataccgttgcaggaccgaat
aacatcggtatcgcagcggaacgtttggaaaaaattctaagcaacctatcaaatcgtggt
gatcgtggcggacaacgcagcggcgggtttaaccgcaaccgtaatggcggaaaccgaagc
ggcggaggcggatatcgtggtaacaacgatcgcaatgccggtggtggcgaacgcagtgga
agcggtgagcgtagcggtggcggtgaacgcggtggaaatgaccgtggtgaacgttcacgc
agtttcagcggacaaaaaccaaaacctcgttattaa
DBGET
integrated database retrieval system
