Sulfurospirillum diekertiae SL2-1: Sdiek1_0003
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Entry
Sdiek1_0003 CDS
T04910
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
suls
Sulfurospirillum diekertiae SL2-1
Brite
KEGG Orthology (KO) [BR:
suls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suls03032
]
Sdiek1_0003
03400 DNA repair and recombination proteins [BR:
suls03400
]
Sdiek1_0003
Enzymes [BR:
suls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Sdiek1_0003
DNA replication proteins [BR:
suls03032
]
Prokaryotic type
DNA Topoisomerases
Sdiek1_0003
DNA repair and recombination proteins [BR:
suls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sdiek1_0003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ARU47192
UniProt:
A0A1Y0HGR5
LinkDB
All DBs
Position
2810..5122
Genome browser
AA seq
770 aa
AA seq
DB search
MSTYGADNIKVLKGLEAVRKRPGMYIGDTNINGLHHLIYEVVDNSIDEAMAGYCDLIKVE
LTREGSCIVIDNGRGIPVGWHEGENMSAATVVLTVLHAGGKFDKDTYKVSGGLHGVGVSV
VNALSSKLIATIKREGNEHRQEFACGIPQTPLGVVKTTNRTGTMIEFWPDNTIFETTEFQ
FEILATRFRELAYLNPKIRIELKDQRDGRAEVYHFEGGIKQFVLDLNKKEKVAEAVHYTA
SIDDVEVDVAMMYNSTYSEIFYSFVNNIKTIDGGTHESGFRAGLTRAITNYISLNAGARE
KDAKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSSYVKPIVQKLVYEQLVKYFEENP
IEAKAIMNKALAAARGREAAKNARDLTRRKDAMSIGTLPGKLADCQSKDPSICELYLVEG
DSAGGSAKQGRDRVFQAILPLKGKILNVEKSRLDKILKSDEIKNMITALGCGIGDEFNEE
KLRYHKLIIMTDADVDGSHIQTLLLTFLFRFLRPIVDNGYVYLAQPPLYRYKKGKKEIYL
KDDHEMNAFLIESGMDSIAIEGVGTPDLVDYFKIISAYRGILKELEKRFAMIEVIRYLIE
NPDLIVLPTEGLFVEIQKFITNLGYNILNHYINDEGIHLFIQTKDGLEELLLDETFYTNP
LYEEARYIYTKIQERDFDVFDGRDPVEVLDEIEKSAKKGAYIQRYKGLGEMNPEQLWETT
MNPENRRLLQVKVEDVEAASDTFTLFMGDEVEPRRQYIQDHAKDVKHLDV
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagtacttacggtgcagacaatattaaagttttaaaaggccttgaagcagtaagaaag
cgtccaggtatgtatatcggtgataccaacattaatggtcttcatcatcttatttatgaa
gtcgttgataactctattgatgaagcaatggcaggctattgtgatctaattaaagtagaa
cttacacgtgaaggttcatgtatcgttattgataatggtcgtggtattcccgttggttgg
catgagggtgaaaatatgtcagcagcaaccgttgttttaacggtacttcatgcaggtgga
aagtttgataaagatacctataaagtcagtggaggtttacacggtgttggtgtttccgtt
gttaatgcactttcatctaaactgattgctacgattaaacgtgaaggaaatgaacatcgt
caagagtttgcgtgtggtattcctcaaacaccattaggcgtggttaaaacgactaatcgt
acgggtacaatgattgagttttggccagataatactatttttgaaacaacagaatttcaa
tttgaaattttggcaacacgtttccgagagcttgcttatcttaacccaaaaattcgaatt
gaacttaaagatcaaagagatggacgtgctgaagtgtaccactttgaaggcggtattaaa
cagtttgttttagatctcaataaaaaagaaaaagtagcagaagctgttcattatactgct
agtattgatgatgtagaagttgatgttgcgatgatgtataactcaacctacagtgaaatt
ttctactcttttgttaataatattaaaaccattgatggtggaacccatgaaagtggtttt
agggctggacttacacgtgctattactaactatatttctttaaatgcaggagcacgtgaa
aaagatgccaaaataacaggtgatgatgttcgcgagggtttgattgctatagtcagtgtt
aaagtacctgaacctcaatttgagggtcaaaccaaaggaaaattgggaagctcttacgtt
aaaccgattgtccaaaaattagtctatgaacaacttgttaaatattttgaagaaaaccct
attgaagctaaagccataatgaacaaagctttggctgcagcacgtggtagagaagcggct
aaaaatgcacgtgatctaacgcgtcgtaaagatgccatgagcattggaacactccctgga
aaattggcagattgtcaaagtaaagatccttctatttgtgaactttaccttgtagagggt
gatagtgcgggtggttctgcaaaacaaggacgcgatcgtgtttttcaagctattttgcca
ctcaaaggtaaaattcttaacgttgaaaaaagccgtttagataagattttaaaatctgat
gagatcaaaaatatgattactgcacttggttgtggtattggcgatgaatttaacgaagaa
aaacttcgttatcacaaactgattattatgaccgatgcggacgttgatggtagccatatt
caaactctacttttaacctttttattccgctttttacgccctattgtagataatggttat
gtttatttagctcagccgccactctaccgttataaaaaaggtaaaaaagagatctatctc
aaagatgatcatgaaatgaatgcctttttaattgaatcaggtatggacagcattgcgatt
gaaggtgttggaactcctgatttagtagattattttaaaatcatttctgcttacagagga
attttaaaagagcttgaaaaacgttttgctatgatcgaagtgattcgttatttgattgaa
aatccagatttgattgtccttcctactgaaggattatttgttgaaattcaaaaattcatt
acaaaccttggttacaatattttaaatcattacatcaatgatgaaggaattcatcttttt
attcaaaccaaagatggtttggaagagcttcttttagatgaaacattctataccaatcca
ctctatgaagaagcacgttacatttacactaaaatacaagaacgtgactttgatgtgttt
gacggacgtgatcctgtcgaagtgttagatgaaattgaaaaaagtgctaaaaaaggtgct
tatatccaacgctacaaaggtcttggtgaaatgaatcctgaacaactttgggaaacaact
atgaatcctgaaaacagacgtcttttacaagttaaggttgaagatgtagaagcagccagt
gacacctttaccctctttatgggtgatgaagttgaacctcgccgacagtacattcaagat
catgccaaagatgtaaaacacttggacgtttaa
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