Sulfurospirillum diekertiae SL2-1: Sdiek1_0079
Help
Entry
Sdiek1_0079 CDS
T04910
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
suls
Sulfurospirillum diekertiae SL2-1
Pathway
suls03410
Base excision repair
suls03430
Mismatch repair
suls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sdiek1_0079
03430 Mismatch repair
Sdiek1_0079
03440 Homologous recombination
Sdiek1_0079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suls03400
]
Sdiek1_0079
DNA repair and recombination proteins [BR:
suls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Sdiek1_0079
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sdiek1_0079
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Sdiek1_0079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ARU47263
UniProt:
A0A1Y0HJ20
LinkDB
All DBs
Position
72561..74144
Genome browser
AA seq
527 aa
AA seq
DB search
MARLLSKEEIKRILQSRFENDECTRLNEIPKPSSLKDIAKASKRIADAMRDHERIAIVGD
YDVDGVISSVILSQFFDDLGVDYSLIIPNRFTDGYGLNPEIVAKLDVHVIITVDNGISAI
EAAQICKEQGIDLIITDHHSIPSVLPDAYAIVNPKQEDCAFPHCEICGAQVAWYLVAALK
EELGVDYNLSNFLDLLCIAIMADMMELVGMNRVMVKKGIVELNHSKRAAFEAIKQYFGKK
TLEGDDISFLIGPLINSSGRMEDAIFSYEFLKSKNVDDALQKLDYIVSLNEARKEEERLL
FESTLPYVKENENIIVAWGEEWHEGIVGIVASRLSKRFKKPAIVFSIKDEKAKGSARGIG
DVDILELIRSQEPLLLGFGGHKGAAGVSIEIKHLEQFRINLVEASSQFTQEALEADNDLL
GEISADQIDFELLEILENQEPYGQKNPKPSFLLRNIAVKVDRLIGKDGQHLKLILQEGSN
ALEALFFNYDIKAKQGDRIDILFTVSRNDYRGLVTPQLLIKQIVKKY
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggctaggttactgagtaaagaggagataaaacggattcttcaaagcaggtttgagaat
gacgagtgcacccgtttaaacgagattcctaagccctcctctttaaaagatattgcaaag
gcatctaaacgtattgctgatgcaatgcgtgaccatgaacgtattgccattgtaggtgat
tatgatgtggatggtgtcatctcttcagttattttaagccaattttttgatgatctaggg
gttgattactccttgattattcccaatcgttttacggatggatatggtttaaatccggag
attgttgcaaaacttgatgttcatgtgattatcaccgttgataatggtatttctgcgatt
gaagcagctcagatttgtaaagaacaagggattgatttgatcattaccgatcaccatagt
atcccctctgttttgcctgatgcgtatgctattgtcaatcccaaacaagaagattgcgct
tttccccattgtgaaatttgtggtgcgcaggtagcatggtatttggttgctgctctcaaa
gaagaattgggtgttgactataatctttctaacttcttggacctcctttgtatcgctatt
atggcagatatgatggagcttgtcgggatgaaccgtgtgatggttaaaaaaggtattgtt
gagcttaatcactcaaaacgtgctgcatttgaggccattaaacagtattttggtaagaaa
actttagaaggcgatgatatttcatttttgatcggacccttgattaatagttcaggtcgg
atggaagatgcaattttttcctatgaatttttaaagtctaaaaatgttgacgatgcttta
caaaaacttgattatattgtttctctgaatgaagcccgtaaagaagaagagcgtctcctc
tttgaatcaacactgccttatgtcaaagagaacgaaaatatcatcgttgcatggggtgag
gagtggcatgagggtatcgtcgggattgtcgcttctaggctttctaaacgctttaaaaag
cctgctattgtcttttctatcaaagatgaaaaggctaaaggaagtgcgagaggtattgga
gatgtagatatcttagagcttattcgttcgcaagagcctcttttacttgggtttggtggg
cataaaggagcagcaggtgtttcaattgaaattaaacatttggaacaatttagaatcaat
ttggtggaagcatccagtcagtttacgcaagaggcactggaagcagataatgatctctta
ggagaaattagtgcagatcaaattgattttgagttattggaaattttggagaaccaagag
ccttatggtcaaaaaaatcctaagccaagctttttactacgtaatattgccgtcaaagtg
gatcgtttgattggtaaagatggacagcatttaaagcttattttacaagagggaagcaat
gcccttgaagcgctcttttttaactatgatattaaagctaagcaaggtgatcgcatcgat
attttatttacggtttcccgcaatgattatcgagggctcgtgacacctcagcttttaatc
aaacagatcgtaaagaaatattaa
DBGET
integrated database retrieval system
