Sulfurospirillum diekertiae SL2-1: Sdiek1_0443
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Entry
Sdiek1_0443 CDS
T04910
Name
(GenBank) Bifunctional DNA-directed RNA polymerase subunit beta-beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
suls
Sulfurospirillum diekertiae SL2-1
Pathway
suls03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
suls00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sdiek1_0443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
suls03021
]
Sdiek1_0443
03400 DNA repair and recombination proteins [BR:
suls03400
]
Sdiek1_0443
Enzymes [BR:
suls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sdiek1_0443
Transcription machinery [BR:
suls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sdiek1_0443
DNA repair and recombination proteins [BR:
suls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sdiek1_0443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
DUF6675
DNA_pol_alpha_N
TTC3
Motif
Other DBs
NCBI-ProteinID:
ARU47620
UniProt:
A0A1Y0HI27
LinkDB
All DBs
Position
413489..418015
Genome browser
AA seq
1508 aa
AA seq
DB search
MKRLEPIEIHEESRPRDFKAFQLRLASPEKIRSWSYGEVKKPETINYRTLKPERDGLFCA
KIFGPVRDYECLCGKYKKMRYKGIKCEKCGVEVTSTKVRRSRMGHIELVTPVAHIWYVNS
LPSRVGTLLGVKMKDLERVLYYEAYIVEQAGEAFYDAENKNKVAVYDVLNEEQYQSLQQR
FEDTGFVAKMGGEVIRDLLANIDLVEVLGQLKEDINQTSSEAKKKTIVKRLKVVEAFLNS
GNRPEWMMITMLPVLPPDLRPLVALDGGKFAVSDVNDLYRRVINRNARLKRLMELDAPEI
IIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFS
GRSVIVVGPNLKMDQCGLPKQMALELFKPHLLARLEEKGYATTVKQAKKMIDMKTNEVWE
CLAEVVKGHPVMLNRAPTLHKLSIQAFHPVLIDGKAIRLHPLVCSAFNADFDGDQMAVHV
PLSQEAIAECKILMLSSMNILLPASGKAVTVPTQDMVLGLYYLTLEKPHAKGSNKIFANV
DEVHIAIDAGFLDIHAKIKTRINDRVLFTTAGRLILKSILPDFVPEAHWNRVLKKKNIGA
LVDFVFKEGGIGITAGFLDNIKRLGFKYATESGISVSIDDIRVPEAKVKKIKEAKKKVRE
IQKQFSSGLLTEQERYNKIIDIWTDTNNEVASEMMKLTESHKGGFNSIYMMADSGARGSA
AQIRQLAGMRGLMAKPDGSIIETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAG
YLTRKLIDVAQNVKVTMDDCGTHEGVEITEISESGELVESLYERATGRVLAEDVIDTITN
EVLFTEGTLIDEKSAQALKEASIKSVVIRTPITCKAKKGVCAKCYGTNLAEGTLVRPGEA
VGIISAQSIGEPGTQLTLRTFHIGGTASTESQDRQVIAQKEGFIRYYNVKTYVTKEGKNI
VANRRNAAVLLVEPKIKAPFKGTIEIDTAHEETAITITSASGENIRYTLRKSDFAKPNEL
AGVSGKIEGKFYIPYLSGDMVEINESIVEVIKEGWNVPSRIPYASELKVKNGDPIIQKIH
ADAKGVVKYYKLHGDYLDRIHDIEKGHVVKEKGIFAVVADNDDREAIRHYIPRDSIIDIN
DNSIVEGKTLLAYPSTSEQITIAEWDPYSTPIIAEDAGIVTFEDIEPGISATEQFDDMTG
QSKLVINEYLPSGMKPTIIIANKNGEIVKYQLEPKTAIFVQNGVTVGLADLIGRTPKAIA
KSKDITGGLPRISELFEARRPKNATVIAEIDGTIRFGKPLRSKERIIIEAADGTSVEYLV
DRNTQIHVQPGEFVHAGERLTDGVISSHDILRIMGEKALHYYLISEIQQVYRGQGVAIND
KHIEVIVSQMLRQVRIVDSGDTKFIMGDLISRRRFREENEAVMKMGGEPAIAEPTLLGVT
RAAIGSDSVISAASFQETTKVLTEASIAGKMDMLEDLKENVILGRMIPVGTGLYQNKQFN
IELNPSRG
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgactagaaccaattgagattcacgaagagagccgtcctagggactttaaagca
tttcaattaagacttgcaagtcctgaaaagattcgctcatggagttatggagaggttaaa
aaaccagaaaccattaactatcgtacgctcaaaccagagcgtgatggacttttctgcgcg
aaaatctttggacccgtcagagattatgaatgtctgtgcggaaaatataaaaagatgcgt
tacaaaggcatcaaatgcgagaagtgtggcgttgaagtaacgagcacaaaagtgagacgt
tcacgtatggggcacattgagttagtaactcctgtggcgcatatttggtatgttaactca
cttccaagtcgtgtgggaacgctacttggtgttaagatgaaagatcttgagcgcgtactt
tactatgaagcttacattgttgagcaagcaggtgaagcgttttacgatgctgaaaataaa
aataaagttgcagtttatgatgttcttaatgaagaacaatatcaatcattgcaacaacgt
tttgaagatactggttttgtagcaaaaatgggtggcgaggttattcgtgatttattagcg
aatattgatcttgtcgaagttcttggtcaacttaaagaagatattaaccaaaccagttct
gaagcaaagaaaaaaaccattgttaaacgtctcaaagttgttgaagcattcctcaacagt
ggcaatcgccctgaatggatgatgattactatgttgccagttcttccgccagatcttaga
ccacttgtagcacttgatggtggaaagtttgcggtcagtgacgtcaatgacttgtatcgt
cgtgttatcaacagaaatgctcgtttgaagcgtttgatggaacttgatgcaccagaaatt
attattcgtaacgaaaaacgaatgttacaagaagcggttgatgcactttttgataatggt
cgtcgtgccaatgccgtaaaaggcgctaataagcgtcctttaaaatcgctttcagagatc
attaaaggtaaacaaggacgtttccgccaaaacctacttggtaaaagggttgacttttca
ggtcgttctgttatcgttgttggaccaaacttgaaaatggatcagtgcggtcttccaaaa
cagatggcgttggagctttttaaaccacatttgttagcacgccttgaagaaaaagggtat
gcaacaacggttaagcaagcgaaaaaaatgatcgatatgaaaaccaatgaagtatgggaa
tgtttagcggaagtggttaaaggtcatccggttatgcttaaccgtgcaccaacacttcac
aaactctcaattcaggcatttcatcctgttttgattgatggaaaagcgattcgtttgcac
cctcttgtatgttctgccttcaacgcggacttcgatggcgatcaaatggccgttcacgtt
ccattatcacaagaggccattgctgaatgtaagatcttgatgctgagttcaatgaacatc
ttgcttccagcttcaggtaaagcggtaaccgtcccaacacaagatatggttttgggtctt
tactatttaacactcgaaaaaccgcatgcaaaaggttctaataagatttttgcaaatgtg
gatgaagtccatattgccattgatgcaggatttttagatattcatgcaaaaattaaaaca
cgtatcaatgatagagttctctttacaacagcaggtcgtttgattttaaaatcaatctta
ccagattttgtgcctgaagcacactggaacagagtattgaaaaagaaaaatatcggtgct
ttagttgattttgtctttaaagaaggtggtattggtattactgcaggatttttggataat
attaaaagactcggctttaaatacgcaactgaatcaggtatttcggtttcaattgatgat
atccgtgttcctgaagcaaaagtgaaaaaaatcaaagaagcgaagaaaaaagtacgtgag
atccaaaaacaatttagttctggtttattaactgagcaagaacgttacaacaaaattatt
gatatttggacggatacgaacaatgaagtggcttctgaaatgatgaagcttacggagagt
cataaaggtggctttaactctatttatatgatggcagattctggtgcgcgtggttctgct
gcgcaaattagacagttagcaggtatgaggggtcttatggcgaaaccggatggaagtatt
attgaaacgccaattatttcaaacttccgtgaaggcctaaacgttcttgaatactttatt
tcaacgcatggtgctcgtaaaggtcttgcggataccgctcttaaaacagcgaacgcgggt
tacctaacaagaaaactcatcgacgttgctcaaaatgtgaaagtgaccatggatgattgt
ggtacgcatgaaggcgttgagattactgaaatcagtgaaagcggtgagcttgtagagtca
ttgtatgagagagcaacaggtcgtgttcttgccgaagatgttattgacacaattaccaat
gaagttcttttcacagagggaacattgattgatgagaagagtgcccaagcccttaaagag
gcaagcattaagtcggttgttattcgtacaccgattacatgtaaagctaaaaaaggtgtc
tgcgctaaatgttatggtacgaacttggctgagggcacattggttcgccctggtgaagct
gttggtattatttcagcacaatcgattggtgagccaggtacgcagctaacacttcgtaca
ttccacatcggtggtacggcatcaacggaatctcaagatcgccaagttattgcacagaaa
gagggttttattcgttattacaatgtaaaaacgtatgtgactaaagaaggcaagaatatt
gttgctaaccgcagaaatgcagctgttcttcttgtcgagccaaaaataaaagcaccattt
aaaggtacgattgagattgatacagcacatgaagagacagcgattacaattaccagtgct
agtggtgaaaatattcgttatacccttcgtaaaagtgactttgctaagccaaatgagcta
gcgggtgttagtggtaaaattgagggtaaattctatatcccatatcttagtggcgatatg
gttgaaatcaacgagagtatcgtagaggtcattaaagagggttggaatgttccaagtcgt
attccttatgcgagtgagcttaaagtaaaaaatggtgatccaattatccaaaagattcat
gctgatgccaaaggtgttgtaaaatactataagcttcatggagactatttggatcgtatc
cacgatattgaaaaaggtcatgtggttaaagaaaaaggtatttttgcagtggttgcagac
aatgatgatagagaagcaattcgtcactatattccacgtgattccatcattgatattaat
gataatagcattgtagaggggaaaacgctccttgcatatccttcaaccagtgagcaaatt
accattgctgagtgggatccatactctacgccaattatcgcagaagatgcaggtattgtt
acatttgaagatattgaaccaggtattagtgcaacagagcaatttgatgatatgactggt
caaagcaaactggtcatcaatgagtatctaccaagcggcatgaaaccaaccattattatt
gcaaataaaaatggtgagattgttaagtatcaattagagccaaaaacagcaatctttgtt
caaaatggtgtaacggttggtctagcggatttgattggtagaacgccaaaagcgattgca
aaatcgaaagatatcactggtggtcttccacgtattagtgagctttttgaagcacgtcgt
cctaaaaatgccactgttattgcggagattgatggaacgattcgttttggtaaaccacta
cgttcaaaagaacgtattatcattgaagcagctgatggtacaagtgtcgagtatttagtg
gatcgtaatacacaaattcacgttcaaccaggtgaatttgtccacgcaggtgagcgactc
accgatggtgtaatttcaagccatgatattttacgtattatgggtgaaaaagcacttcac
tattatttgatcagtgaaattcaacaagtctatcgtggacaaggtgttgcgattaacgat
aaacacattgaggttatcgtttctcaaatgcttcgccaagtacgtattgttgacagtggc
gataccaaattcattatgggtgatttgattagtcgtagacgtttccgtgaggaaaatgaa
gcggttatgaaaatgggtggagagccagcgattgctgaaccaacacttttaggtgttacg
cgtgcagcgattggtagtgatagtgttatatcagcggcttcattccaagaaacaacgaaa
gttctaacggaagcgagcatcgcaggtaagatggatatgcttgaagatcttaaagaaaat
gttattttaggacgtatgattccagtaggaaccggtctttatcaaaacaaacaatttaat
attgagttgaatccaagtagaggttaa
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integrated database retrieval system
