Sulfurospirillum diekertiae SL2-1: Sdiek1_0721
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Entry
Sdiek1_0721 CDS
T04910
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
suls
Sulfurospirillum diekertiae SL2-1
Pathway
suls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sdiek1_0721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suls03019
]
Sdiek1_0721
03016 Transfer RNA biogenesis [BR:
suls03016
]
Sdiek1_0721
Enzymes [BR:
suls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Sdiek1_0721
Messenger RNA biogenesis [BR:
suls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Sdiek1_0721
Transfer RNA biogenesis [BR:
suls03016
]
Prokaryotic type
tRNA degradation factors
Sdiek1_0721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
PIN_8
Motif
Other DBs
NCBI-ProteinID:
ARU47890
UniProt:
A0A1Y0HIW5
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All DBs
Position
691566..693812
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AA seq
748 aa
AA seq
DB search
MEYKITVNNQEEIYDLGKVAKQAAGAALLKIKNTVILATVARDDSQVSENFVPLTVQYVE
KTYAVGKIPGGYFKRETKPGDFETLTSRIIDRSLRPLFPKGYAYPTQIVVFVLSCDPEVD
LQVAALNAASAALYLSDIPVNKAVAGVRIGYIDGKYVVNPSNSALKTSTLDLYVAGTKEE
LLMIEMRSIASMESMNLPIMAIDPMLDPTLAESVITKQSINEFNEDAILEAIDKAQSAIT
EATSAYEQTFAPLKKEDAELDYKEDLENDSIFAYIDEFYKQDVHNAINQMAKSERANELN
KIVTKILSDEVAVLEGWSKELVSSVINAYKKKIVREMIIDKHVRADGRKLNEIRPISIET
NILPLAHGSCLFTRGQTQALAVVTLGNDKDAQMYDLLTEKNTINDTFMVNYNFPGFSVGE
ASPLRSPGRRELGHGNLARRALEPVLDINRLQTIRLVSEILESNGSSSMATICGGVLALK
AAGINIEKLVAGIAMGLVFEGDKHAVLSDIMGLEDHDGDMDFKVAGTRDGITALQMDIKL
GGISRDVLKEALYQAKEGRAHILGLMEAASQEIVVNNSILPKLELFSVDPSKIVDIIGQA
GKTIREIIEKFEVSIDLDREKGEVKIAGENKEKVEAAKEHIIQITNKPSFGGRGGGRDRG
GDRHGSTPREEKPVPTFVQDEVVDGVVKRIVDFGAFIELPGGIDGLLHVSKIADHRVDKV
SDYLALEQKVRVKILKQTGNKIELGLER
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
gtggaatataaaattaccgttaataatcaagaagagatttatgatcttggaaaagttgca
aaacaagcagcaggtgctgcattattgaaaattaaaaacactgttattttagcaacggtt
gcaagagatgacagccaagtttcagaaaattttgtaccattgaccgtacaatatgttgaa
aaaacatatgctgttggaaagattcctggtggttattttaaacgagaaacaaagcctggt
gattttgaaacacttacctcacgcattattgatcgaagtcttcgcccccttttccctaaa
ggatatgcttatccaacccaaattgttgtttttgtcttaagctgtgatcctgaagttgat
cttcaagtagctgcacttaatgctgctagtgcggcactctatctttctgatattcctgtc
aataaagcagttgcaggtgtacgaataggatatattgatggaaaatatgttgttaaccct
tctaattcggctttaaaaacaagcactttggatctttacgttgcaggtacaaaagaagaa
cttttgatgattgaaatgcgctctattgcatcaatggaaagcatgaatcttccaatcatg
gccattgatccaatgcttgatcctacattagcagaaagtgttattacaaagcaatcgatt
aatgaatttaatgaagatgcaattttagaagcaattgataaagctcaaagtgcgattact
gaggctacaagtgcgtatgagcaaacatttgcacctttgaaaaaagaagacgcagagctt
gattataaagaagatttagaaaatgattctatctttgcctatattgatgaattttataag
caagacgtgcataatgccatcaatcaaatggcaaaaagtgagcgagctaatgagcttaat
aaaattgtaactaaaattttaagtgatgaagttgccgttttagaaggatggagtaaagag
cttgttagcagtgtgattaatgcatataaaaagaaaatagtacgtgaaatgattattgat
aaacatgttcgtgcggatggtagaaaactcaatgaaataagacctattagtattgagacc
aatattttaccattggcgcatggatcatgtctttttacccgtggacaaacacaggcttta
gctgtcgtgacactgggtaacgataaagatgcacaaatgtatgatcttttgactgaaaaa
aatacaattaatgatacctttatggtgaattataattttcctggattctccgtgggtgaa
gcttctcctcttcgttcaccagggcgcagagagttaggacatggtaatcttgcacgccgt
gccttagagccggttcttgatataaaccgtctccaaacaattcgacttgtgtctgaaatt
ttggagtcaaatggttcgtcttcaatggcaaccatttgtggtggagtattagcacttaaa
gcggcagggattaatattgaaaaattagttgcaggtattgccatggggcttgtttttgaa
ggtgataaacatgcagttttaagtgatattatgggcttagaagaccatgatggtgatatg
gattttaaagtcgcaggaacaagagacggtataactgcgctacaaatggatattaaactc
ggtggtatttcacgtgatgtccttaaagaggcattataccaagccaaagagggaagagcg
catattttaggattaatggaagcagcaagtcaagagattgttgttaacaattctattttg
ccaaaacttgaacttttcagtgttgatccatcaaaaattgtggatattattggacaagca
ggtaaaactatccgagaaattattgagaagtttgaggtctctattgatcttgatcgagaa
aaaggtgaagttaaaatcgcaggtgaaaacaaagaaaaagttgaagctgcaaaagagcac
atcattcaaattaccaacaagccttcctttggtggacgtggtggtggaagagatagagga
ggggatagacatggtagtacccctagagaagagaagccagtgccaacatttgttcaagat
gaagtggtcgatggtgttgttaaacgtattgttgattttggtgcatttattgaacttcct
ggtggtattgatgggctattacatgtttcaaaaattgccgaccatcgtgtggataaagtc
agtgattatcttgcccttgagcaaaaagtacgtgtcaaaatcttgaagcaaacggggaat
aagatagagttagggctagagcgctaa
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