Sulfurospirillum diekertiae SL2-1: Sdiek1_0763
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Entry
Sdiek1_0763 CDS
T04910
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
suls
Sulfurospirillum diekertiae SL2-1
Pathway
suls03030
DNA replication
suls03430
Mismatch repair
suls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sdiek1_0763
03430 Mismatch repair
Sdiek1_0763
03440 Homologous recombination
Sdiek1_0763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suls03032
]
Sdiek1_0763
03400 DNA repair and recombination proteins [BR:
suls03400
]
Sdiek1_0763
Enzymes [BR:
suls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sdiek1_0763
DNA replication proteins [BR:
suls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sdiek1_0763
DNA repair and recombination proteins [BR:
suls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sdiek1_0763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ARU47931
UniProt:
A0A1Y0HIK6
LinkDB
All DBs
Position
742072..745617
Genome browser
AA seq
1181 aa
AA seq
DB search
MSDTPYTHLHLHTEYSLLDGANKIGKLVKKLKSQGVTSVAITDHGNMFGAIDFYKTMRKE
GIKPIIGMEAYIHNQEDIGDKTTKQRFHLCLYAKNEVGYKNLMYLASMSYIKGFYYYPRI
NKQMLREHSEGLVCSGACLQGEVNWHLNLNNKRNVQFGAKGYERAKEVALEYKAIFGEDF
YLELMRHGITDQHFIDDDILRISKETGIKVIATNDTHYLEQDNAEAHEAFMCIAMNKEFD
DPNRLRHSVHEFYLKSPAQMSDLFADIPEAISNTQEIVEKCNLEIKLGDPTPPKFKFTKE
YAAKEGLSFESDDEFFAYHSRKGLEKRLLHVDASKHEEYRARLEREIDIICKMKFPGYML
IVWDFIREAKERGVPVGPGRGSAAGSLVAFSLFITDIDPMPYNLLFERFLNPERISMPDI
DIDFCQSRRGEIIDYVVEKYGRYNVAQVITFGKLLAKGVIRDVARVLAIPYAEADAMAKL
IPDELGITLNGVGTEGEEGYKPGAYQKEPKLRELIESSPKMQRVWKFALALEGLNRNSGM
HAAGVVISDEELWHKTPLYQPSGEDHLVTQYSLNYLEDVDLIKFDFLGLKTLTVIDNALK
LIRARYQKEIDFTTIDMNDPKVYELIQSGETVGLFQIESSGMQSLNERLKPTNFEDLIAV
LALYRPGPMESGMLDDFIERKNGLKEISYFFDEFTKPLRPILEPTYGVIVYQEQVMQIVQ
AIGGFSLGEADLIRRAMGKKKIDYMKQKAEEFAQGAVNQGLDRAHAIELFGLIEKFAGYG
FNKSHSAAYAMVTFETAYLKCYYPQEFMAALLTSEQDNTDKIVKYIDEVKRLGLKLLPPS
IQHSLIEFSAITDTDGQEAILFGMGAIKGVGNAAISKILEAREGALFADMSDFISRIDSS
KVNKKVLESFIKSGSFDDFGYSRRALLENIDAIIEASAECSRAKKMAEYSLFGDAEEMMT
VQVSIEDIPEFDNKRMLELEKETIGFYISGHPLDAFRAEIDEMSYTLSSERDQVEDGSKA
LFIGKVEGITEKISKKGNKFGIISLMDFHGSMELTVFEKQLELLSRMDLEKPLCFKVDVS
NDGQNTKMRVMKIMELSEAKKEKIETKVIEVPQEPKVLLLDLSDDTSKLEFLYQIVRQNS
GRRPLHLVITSKLQDVVIETGFSVDDSIDEQIAALEYVKVV
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacaccttacacacatttacatttacatactgaatattcactccttgatggc
gccaataaaataggcaagctggtcaaaaaactcaaatcccaaggcgtgacttctgttgcc
ataaccgatcatggaaacatgtttggcgcgattgatttttacaaaaccatgcgtaaagag
ggcattaagccgatcattggcatggaagcgtacattcacaaccaagaggacatcggcgat
aaaaccaccaaacaacgttttcacctctgtttatacgctaaaaatgaggtcggttataaa
aacttgatgtatctggcttccatgagttacatcaaaggcttttactactatccacgtatt
aacaaacagatgttacgcgaacactccgaagggctggtttgctcgggtgcgtgtctgcaa
ggcgaagtcaactggcatctgaatctcaacaacaaacgtaatgtccaatttggcgcaaaa
gggtatgagcgtgccaaagaagtagcgcttgagtacaaagcaatttttggcgaggacttt
tacttagagctgatgcgccatggtattaccgatcaacacttcatcgacgatgatattttg
cgcatctccaaagagacgggcattaaagtgatcgccaccaatgacacccactacttagag
caagacaatgccgaagcgcacgaggcgtttatgtgtattgcgatgaacaaagagtttgat
gaccctaaccgtctgcgccactccgtacacgagttttacctcaaatcgcctgcgcaaatg
agcgacctttttgccgacatccctgaagcgatttccaatacgcaagagattgtggaaaag
tgtaatttggagattaaactgggcgatccaacgcctcccaaatttaaatttaccaaagag
tatgccgccaaagaaggactcagttttgaaagcgatgatgagttttttgcgtaccacagc
cgtaaaggattggaaaaacgccttttacatgtcgatgcgagtaagcacgaagagtatcgc
gctagactggagcgggaaattgacattatctgcaagatgaaattccccggttacatgctg
atcgtttgggattttatccgtgaagccaaagagcgcggtgtgcccgtaggtcctggacgg
ggttcagcagcgggtagtttggtcgcattttcgcttttcattaccgacatcgacccgatg
ccttataacctgctcttcgagcgatttttgaaccctgaacgtattagtatgcccgatatc
gatattgacttttgtcagagtcgtcgtggtgaaatcatcgactacgtcgtggaaaaatac
ggacgttacaacgtggcgcaagtcatcacgtttggtaaactcttagccaaaggagtcatt
cgtgacgtggcgcgtgttttagcgattccgtatgctgaagccgatgcgatggcaaaactg
atccccgatgaactgggcattacgctcaatggtgtgggaacagagggcgaagaggggtat
aaaccaggtgcctaccaaaaagagcccaaacttcgtgaactcatcgaaagcagccctaag
atgcaacgcgtgtggaaattcgcgctcgctttagaaggactgaatcgtaactcgggtatg
catgccgcgggtgtcgttattagcgatgaagagttgtggcataaaacgccactttatcag
ccctccggcgaagatcatcttgtgacccagtattcgctcaattaccttgaagatgtggac
ttaatcaagttcgactttttgggtctgaagaccctaacggtgattgataatgcgctgaaa
ctgattcgcgcacgttaccaaaaagagatagattttacgacgattgatatgaacgaccct
aaggtgtatgaactgattcaaagcggtgaaacggtgggattgtttcagattgagtccagt
ggtatgcaatctttgaatgaacgcctcaaaccgactaactttgaagacctgatcgccgta
cttgcactttatcgcccaggtccgatggagtcaggcatgctcgatgactttattgagcga
aagaacggtttaaaagagatcagctacttctttgatgagtttacgaaaccgcttcgcccg
attttggagccaacgtacggggttatcgtttaccaagaacaggttatgcagatcgttcaa
gcgattggcggttttagccttggcgaagcggatttgattcgtcgtgcgatgggtaagaaa
aagatcgactacatgaaacaaaaagccgaagagtttgcgcaaggtgcggtcaatcaaggg
ctcgatcgtgcgcatgccattgagctgtttggcttaatcgagaagtttgcaggatacggt
tttaacaaatcgcactccgcggcgtacgcgatggttacctttgagacagcgtatctgaaa
tgctactatccgcaagagtttatggcggcacttctcacttcagagcaagacaataccgat
aaaatcgtaaagtacatcgatgaggtcaaacgtcttggtttgaagcttttacctccttcc
attcagcactcattgattgaatttagtgcgattaccgacaccgatgggcaagaggcgatt
ttgtttggtatgggcgcaattaaaggggtcggcaatgcggcgatcagcaaaatactcgaa
gccagagagggcgcactttttgccgatatgagcgattttatctcgcgcattgacagctca
aaggtcaataaaaaagtgttggaatcgttcattaaatcgggaagttttgatgattttggc
tactcaaggcgtgctttactcgaaaatattgacgccatcattgaggcaagtgcggagtgt
agtcgggctaaaaaaatggcagagtattccctttttggtgatgccgaagagatgatgacg
gtacaagtgagcattgaggatattcctgaatttgataataaacgcatgcttgaacttgag
aaggagacgattggtttttacatctctgggcatccattggacgcatttagagcagaaatt
gatgagatgagctatacactctccagcgagcgcgatcaagttgaagatgggagtaaagcc
ctttttattggaaaagtggaaggaattaccgagaaaatcagcaaaaaaggcaataagttt
ggcatcatctctttgatggattttcacggttctatggaactcacggtgtttgaaaaacag
cttgaattgctctctcgaatggatttggaaaaaccactctgctttaaagtcgatgtgagc
aatgatgggcagaataccaaaatgcgtgtcatgaaaatcatggagctcagtgaagcaaaa
aaagagaaaattgagaccaaagtcattgaagtgcctcaagagcccaaagtgcttctgctt
gacctgagtgacgataccagtaaattagagtttttataccaaattgtacgtcaaaattct
ggacgcaggccacttcatcttgtcatcacgtccaagctacaagatgtggtgattgagaca
ggttttagcgtggatgatagcattgatgaacagatcgcagcacttgagtatgtgaaggtc
gtttag
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