Sulfurospirillum diekertiae SL2-1: Sdiek1_0907
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Entry
Sdiek1_0907 CDS
T04910
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
suls
Sulfurospirillum diekertiae SL2-1
Brite
KEGG Orthology (KO) [BR:
suls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
suls03009
]
Sdiek1_0907
Enzymes [BR:
suls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Sdiek1_0907
Ribosome biogenesis [BR:
suls03009
]
Prokaryotic type
rRNA helicases
Sdiek1_0907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Ubiq_DUF_assoc
CMS1
Phage_integrase
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ARU48074
UniProt:
A0A1Y0HL08
LinkDB
All DBs
Position
893192..894562
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AA seq
456 aa
AA seq
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MFNAFITEPKMLQNLNDLGYVSMTPIQKACIPLALAGRDLVAKAKTGSGKTAAFGIPLLM
ALHVNSMRIQSVVLCPTRELAEQVSAELRRLARFAHNIKIVTLCGGARFVPQCINLEHGA
HIVVGTPGRILQHLQEKTINFEHIKTLVLDEADRMLDMGFYEDIEKIIAKMPQKRQTLLF
SATFPKEIERMCHEVQNDALHVSIEEEATTSPNITQVCYTVEPREKEAALKGVLLESDAK
SVIIFCKTKIGVAELQGYLLDEGFDALSLHGDLEQIDRDEHLLLFANGSAQILVATDLAS
RGLDVKDVEMVINYELPQTMEIYTHRIGRTGRMEKEGMAVSFVTPREEGFFEELKESNFA
FTCKSISDLNPTLSKPKKALYITLCIDAGKKHKMRAGDILGTLTKDLGLEAGVIGKIDIL
EKFSYVAIAREYADKAFEGLCATTIKNRRFKIWKLG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgcgtttatcaccgagcctaaaatgctccaaaacctcaatgatttgggttat
gtatccatgactccgattcaaaaagcgtgcattcctttagcgcttgcaggccgtgacctt
gttgccaaagccaaaacaggcagtggaaaaacagcagcgtttggaataccacttttgatg
gcgttacatgtaaactccatgcgcatccaatctgtcgtgctatgtcccactcgcgagctt
gctgaacaagtcagcgcagagctcagacgacttgccagatttgcccataatatcaagatc
gtcacactctgtggcggtgctcgttttgtaccacagtgcatcaacctagagcatggcgca
catatcgttgtgggaacgccagggcgcattttgcagcatttgcaagagaagaccatcaac
tttgagcacattaaaacactcgtcctcgatgaagccgatcgcatgctcgatatgggtttt
tacgaagatatcgaaaaaatcatcgccaagatgccacaaaaacgccaaaccttgctcttc
tccgccaccttccccaaagagatcgagcgcatgtgccatgaagtgcaaaatgacgcttta
catgtcagcattgaagaagaagccactacgtctcctaatatcacgcaagtatgctacacc
gtagagccacgcgaaaaagaagcagcacttaaaggtgttttactcgaaagtgacgctaag
tcggtcatcatcttttgcaaaaccaaaatcggggtcgccgagcttcaaggctacctactc
gatgaaggttttgacgcgctttccttacatggtgacttagagcagatagacagagatgaa
cacttgcttctctttgccaacggcagtgcgcaaatcctcgttgccaccgacctcgcctca
cgcggactggatgtcaaagatgtcgagatggtcatcaactacgaactccctcaaacgatg
gaaatttacacgcatcgtatcggacgaacaggacgcatggaaaaagaaggcatggcagtc
agcttcgtcacgccacgagaagagggcttctttgaagaacttaaagagtccaattttgcc
tttacatgtaaaagcatcagtgatctaaatccaaccctttcaaagcctaaaaaagccctg
tacatcacactgtgtatcgacgcaggcaaaaaacacaaaatgcgcgcaggtgacatcttg
ggaaccctcaccaaagacttaggactggaagctggcgttatcggtaaaatcgacatctta
gagaaattttcttatgttgccatagcgcgcgaatatgctgataaagcgtttgagggactg
tgtgctacgacgattaaaaatagacggtttaagatatggaagttgggatga
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