Sulfurospirillum diekertiae SL2-1: Sdiek1_1556
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Entry
Sdiek1_1556 CDS
T04910
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
suls
Sulfurospirillum diekertiae SL2-1
Pathway
suls02020
Two-component system
suls02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
suls00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sdiek1_1556
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sdiek1_1556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
suls03021
]
Sdiek1_1556
Transcription machinery [BR:
suls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sdiek1_1556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
MarR
Dehydratase_SU
Motif
Other DBs
NCBI-ProteinID:
ARU48719
UniProt:
A0A1Y0HKR1
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Position
1490494..1491765
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AA seq
423 aa
AA seq
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MKLRVSSTQTTKQKFSSTLRGWLPILQANLDSLVETLEPFVQENPFISVKSGSETPEKHF
EKKSFFSEVAKTSVSDTIEALTLDKKSLYQVLNEQVNPPLFPTEKSQQVAYEIIENINSE
GYFEIAALSEIAKKLGMKIEEVEKIRQRFAYLEPLGIGALDLKETFLFQLQDLSLDNELY
DMVEMLIINFETIESFSKEPLFHDALAIIKRFHNPPAIDFMEDEKEVIPDIFIYDLEGAI
EVRLNDAYYPEVILDTEGLDENHSFVSQKIKDAKDLIDALEMRKATLYKIGLMIVEYQYD
FFFGKAIKPMKLKDLADDLGRNPSTISRAIAGKYLSCSRGVIPLKQFFATALEEDISNSA
IKEYMIELVKNESRIKPLSDIKLLELIEGKFNIKMVRRTITKYRQQFNIASSSERKKLYT
LKF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacttagggtttctagcacacaaacaaccaaacaaaagttctcctcaacgctaaga
ggttggcttcctatacttcaagccaatttggatagtttggtggaaacattagaacccttt
gtgcaagaaaatccttttatcagtgtcaaatcaggttcagaaacacctgaaaaacatttt
gaaaagaaaagttttttctccgaagtggctaaaacatcggtttcagataccattgaggca
ctgactttagataaaaaatcactttatcaagttctcaatgaacaggtcaatccaccactt
tttcctactgaaaaatcgcaacaagtcgcgtatgaaatcattgaaaatattaattctgaa
ggatattttgaaatagcagcattaagcgaaattgcaaaaaagttaggcatgaaaattgaa
gaagttgaaaagatacgacagcgctttgcttaccttgagcctttgggtattggagctctt
gatttaaaagagaccttcttattccaacttcaagacctttcattagacaatgaactctat
gacatggtagaaatgctgattatcaactttgagactatcgaatcctttagtaaagaacca
ctgtttcatgatgccctcgctattattaaacgattccacaaccctcctgcaattgatttt
atggaagatgaaaaagaggttattcctgatatttttatctatgatcttgaaggtgcaatt
gaagtcagactcaatgatgcgtattatcctgaagtgattctcgacactgaaggacttgat
gaaaatcatagttttgtctctcaaaaaattaaagatgctaaagaccttattgacgctctt
gagatgcgcaaagcaacgctctataagattggattgatgattgtggagtatcagtacgat
tttttctttggcaaagcgataaagccgatgaaacttaaagacttagctgatgatctagga
cgtaatccctcaaccatttcacgtgccattgcgggaaaatacctttcctgtagccgcggt
gttattcctttaaaacagttttttgctacggcgcttgaagaagatatttcgaacagtgct
attaaagaatatatgattgaacttgttaaaaatgagagtagaataaaacctctgagcgat
attaaacttctagaactgatagaaggaaaatttaacatcaaaatggtacgaagaaccatt
acaaaataccgacaacagtttaatatcgcaagctcatctgagcgtaaaaaactctacact
cttaaattttaa
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