Sulfurospirillum diekertiae SL2-1: Sdiek1_2066
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Entry
Sdiek1_2066 CDS
T04910
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
suls
Sulfurospirillum diekertiae SL2-1
Pathway
suls03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
suls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sdiek1_2066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suls03400
]
Sdiek1_2066
DNA repair and recombination proteins [BR:
suls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sdiek1_2066
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sdiek1_2066
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
T2SSE
Kinesin
DUF87
SWI2_SNF2
DUF1128
Microtub_bd
AAA_14
UB2H
AAA
nSTAND_NTPase5
AAA_22
TerB
Motif
Other DBs
NCBI-ProteinID:
ARU49225
UniProt:
A0A1Y0HPG4
LinkDB
All DBs
Position
1992025..1994001
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AA seq
658 aa
AA seq
DB search
MSEFYLESPYQPSGDQPQAIDKLVSSIQKGSRYQTLIGVTGSGKTYTMAQIIQKLKMPTL
IMTHNKTLAAQLYSEFKGFFPKNHVEYFISYYDYYQPEAYIPRSDLFIEKDSSINEELER
LRLSATASLLSFDDVICVASVSANYGLGDPNEYKEMVLVIEKGESFNQKKLLLRLVDMGY
KRNDTFFDRGCFRVSGDVIDIYPAYSEEEAIRVEFFGDEVESINYFEVFLNKKLQNLNKV
VIYAANQFIVGHERLQKAIKSIEQELDERLEYFKKEDKLVEYQRLKQRVEFDLEMLQSTG
ACKGVENYARYLTGIEPGATPYSLFDYYESMNKEYLVIVDESHVSLPQFRGMFAGDRSRK
EVLVEYGFRLPSALDNRPLMFDEFINKAPRYLFVSATPKELELGLSGDNTAEQIIRPTGL
LDPEVEILSSKNQVETLFDKIKEVIAKDEKVLVTVLTKKMAEELTRYYADLGIKIRYMHS
DIDAIERNQIIRSLRVGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQT
MGRAARNLNGRVIMFAEKITDSMQKAIETTLRRRAIQETYNQEHNITPTSTTRKMDENLK
LEEHADIYNMFDKKEKIPPSEKKKIIAELTKSMHEAAKILEFEKAAKLRDQIEKLKKM
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattttatttagaaagtccctatcagccatcaggcgatcaaccgcaagccatc
gataaactcgtctcttccatccaaaaaggaagtcgttaccaaacattgattggtgtgacg
ggcagtggtaaaacctatacaatggcacagatcattcaaaaacttaagatgccaaccctc
atcatgacgcacaacaaaacccttgccgcgcaactttacagcgaatttaagggctttttt
cctaaaaatcatgtggagtattttatcagctattacgactactatcaacctgaggcgtat
attccaagaagtgatcttttcatcgaaaaagacagttctatcaacgaagagttagagcgt
ttgcgtctcagtgccaccgcatcactgcttagttttgatgatgttatctgtgtcgcttcc
gtttcagctaactacggcttgggcgatccgaatgaatacaaagagatggtgctcgtcatc
gaaaagggtgaaagtttcaaccaaaagaagcttctcttacgtcttgtcgacatgggctat
aaacgcaatgacactttttttgatcgcggttgttttagggtcagtggcgatgtcatcgac
atttaccctgcatacagtgaagaagaggcgattcgcgtggagttttttggcgatgaagtg
gagagcatcaactactttgaagtctttctcaacaaaaaactgcaaaacctaaacaaagtc
gtcatttatgccgcgaaccagttcatcgtcggacacgaaaggcttcaaaaagcaatcaaa
tccatcgagcaagagctagatgagaggcttgaatacttcaaaaaagaggacaagctggtc
gagtaccaacgactcaaacaacgtgtcgagtttgaccttgagatgcttcaaagcacggga
gcgtgtaaaggggttgaaaactatgcgcgttaccttacaggcattgagccaggagctacg
ccctattcactgtttgattactatgagtcgatgaataaagagtaccttgtcattgtcgat
gaatctcacgtcagccttccgcaatttcggggtatgtttgcgggtgatcgtagtcgtaaa
gaagtgcttgtcgagtacggttttaggcttccaagtgccttggataaccgtcctttgatg
tttgatgagtttatcaacaaagcaccacgctatctgtttgtcagcgcaacacctaaagag
ttggaattggggctgagtggtgacaataccgcagagcagatcatacgcccaacaggtttg
cttgatccagaagtcgaaatcttaagcagtaaaaaccaagtcgaaaccctttttgataag
atcaaagaagtgatcgccaaagatgaaaaagtccttgtgacagtgcttacgaaaaagatg
gcagaagagctaacacgctactacgccgaccttggtatcaaaataagatacatgcactcg
gacattgacgcgattgagcgcaaccaaatcattcgctctttgcgtgtgggcgagtttgac
gttctcgtgggcattaacctccttcgtgaagggcttgatttgcctgaagtttcacttgta
gccatcttggatgccgacaaagagggatttttacgttccgaaacgagtctgattcaaacg
atgggtcgtgcggcgcgcaatcttaatggtagagtcattatgtttgccgaaaagatcaca
gactcgatgcaaaaagcgattgaaacgacgctcagacgccgtgccattcaagagacctac
aatcaagaacacaacatcacgccaaccagtaccacacgtaaaatggatgaaaacttaaag
cttgaagaacatgccgacatctacaatatgtttgataagaaagagaagattccaccgagt
gaaaagaagaaaattattgcggaattgaccaagtccatgcatgaagcggcgaagattttg
gagtttgaaaaagcagcgaaattacgcgatcaaattgaaaaattgaaaaagatgtaa
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