Sulfurospirillum diekertiae SL2-1: Sdiek1_2724
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Entry
Sdiek1_2724 CDS
T04910
Name
(GenBank) DEAD-box ATP-dependent RNA helicase RhpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
suls
Sulfurospirillum diekertiae SL2-1
Pathway
suls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sdiek1_2724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suls03019
]
Sdiek1_2724
03009 Ribosome biogenesis [BR:
suls03009
]
Sdiek1_2724
Enzymes [BR:
suls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sdiek1_2724
Messenger RNA biogenesis [BR:
suls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sdiek1_2724
Ribosome biogenesis [BR:
suls03009
]
Prokaryotic type
rRNA helicases
Sdiek1_2724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SecA_DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARU49872
UniProt:
A0A1Y0HP16
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All DBs
Position
2601518..2603320
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AA seq
600 aa
AA seq
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MENNTTTFESFGLHPEILKAVVEAGFTEPSPVQVEAIPLVLAGNDIVAQAQTGTGKTAAF
GLPTLSMLDQHLNKVQLLVITPTRELATQVSDELYSLGRFCGIKTVTIYGGSSYSRQIGL
IEKGASVIVATPGRMLDLLKNGRLPGFAPKMVVLDEADEMLDMGFLEDIEEIFTYLPKER
QTLLFSATMPDPIKRLASKILHEPKFVSITPKDHTTNEDIEQLYYVINEYERDDAMIRLL
DALEPEKSIVFCRTKKEVDRLSTQLMAVGHAAKGLHGDMEQNQRESVIKAFRSSQIEILV
ATDVAARGLNVADISHVFNYHMPFDPESYVHRIGRTGRAGKKGTAITLVTPIEFHSMQRI
GKKVGSKIEHRIVPSLRDVKENKLVKIADDIKNAELNENASKLLSILEEEMDMSQIALKL
LSNLLKENTPVGPDKIGLDKKTLESVVKNIEERDGGRGGRSGGYRGNSGGGYRGSRDGGG
YRGNSGGSRDGGGYRGTSSTGSRDGGGYKGSNPRDGGSRDAARPPRGDGVPRSDSRGESR
NPFAKEGSSSAPREGGGYKGTRDSGDSRPPRAPRADRPSAPRSDAGRAPKAAPRNAYKKD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaacacaaccacatttgaatcatttggcttacacccagagattcttaaagcc
gtcgtagaggctggctttacagaaccaagccccgtacaagtagaagcaatccctttagtg
ctagcgggtaacgacatcgttgcacaagcacaaaccggtacaggaaaaacagctgctttt
ggactcccaacactcagtatgctcgatcaacatctcaataaagtacaacttttagtcatt
acgcccacacgtgaacttgcaacccaagtgagcgatgagctttactcattaggtcgcttt
tgtggcattaaaaccgttacgatctacggtggtagttcgtattcacgccaaattggcttg
atcgaaaaaggtgctagcgttatcgtagcaacacctggtcgtatgcttgatcttcttaaa
aacggcagacttccaggttttgcacctaagatggtcgttttagatgaagcggatgaaatg
ctcgatatgggctttttagaagacattgaagaaatctttacttaccttccaaaagagcgt
caaacccttcttttctcagcaacaatgccagatcctatcaaacgccttgcaagtaaaatc
ttacatgagccaaaatttgtcagcattacgccaaaagatcacaccacaaacgaagacatt
gaacaactttactacgtgatcaacgaatatgagagagacgatgcgatgattcgtctttta
gatgcacttgagcctgaaaaatccatcgtattctgccgtaccaaaaaagaggttgacaga
ctttcaacacaactcatggcagttggacatgccgctaaaggcttacacggcgatatggag
caaaatcaacgtgagagcgttattaaagcattccgtagttcacaaatcgaaatccttgtc
gcaaccgacgttgcagcacgtggtctaaacgttgctgacatcagccacgttttcaactac
catatgccatttgatccagagagttacgttcaccgtatcggaagaaccggacgtgcgggc
aaaaaaggtacggcgattactttagtaacgcctattgaatttcactccatgcaacgtatc
ggtaaaaaagtcggctctaaaatcgagcacagaattgttccaagtttacgcgatgtgaaa
gagaacaaactggttaaaattgctgatgatattaaaaatgctgaactcaatgaaaatgca
agcaaacttctttcgattcttgaagaagagatggatatgtcgcaaatcgcgcttaaactt
ctctcaaaccttttgaaagaaaatacaccagtaggtcctgataaaatcggtttagataaa
aaaaccttagagtctgtggttaaaaacatcgaagagcgtgatggtggtcgtggcggcaga
agtggcggttacagaggaaactctggcggcggttacagaggctcacgtgatggtggcggc
tatagaggaaactctggcggatcacgcgatggcggcggctatcgaggtacatcatccaca
ggttcacgtgatggtggcggatacaaaggttctaacccacgtgatggcggaagcagagat
gcagcacgtcctccaagaggcgatggcgttcctagaagtgatagcagaggcgagagccgt
aacccttttgccaaagagggaagcagttcagcaccacgcgaaggcggcggatacaaaggg
actcgtgatagcggcgatagcagaccaccacgcgctccaagagccgatagaccaagtgca
ccacgctctgatgcaggacgtgctccaaaagccgctcctagaaacgcttacaaaaaagac
taa
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