Sulfurospirillum diekertiae ACSTCE: FA592_10855
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Entry
FA592_10855 CDS
T06548
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sult
Sulfurospirillum diekertiae ACSTCE
Pathway
sult03030
DNA replication
sult03430
Mismatch repair
sult03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sult00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FA592_10855 (dnaE)
03430 Mismatch repair
FA592_10855 (dnaE)
03440 Homologous recombination
FA592_10855 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sult03032
]
FA592_10855 (dnaE)
03400 DNA repair and recombination proteins [BR:
sult03400
]
FA592_10855 (dnaE)
Enzymes [BR:
sult01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FA592_10855 (dnaE)
DNA replication proteins [BR:
sult03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FA592_10855 (dnaE)
DNA repair and recombination proteins [BR:
sult03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FA592_10855 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QIR79326
LinkDB
All DBs
Position
699861..703406
Genome browser
AA seq
1181 aa
AA seq
DB search
MSDIPYTHLHLHTEYSLLDGANKIGKLVKKLKSQGVTSVAITDHGNMFGAIDFYKTMRKE
GIKPIIGMEAYIHNQEDIGDKTTKQRFHLCLYAKNEVGYKNLMYLASMSYIKGFYYYPRI
NKQMLREHAEGLVCSGACLQGEVNWHLNLNNKRNVQFGAKGYERAKEVALEYKEIFGEDF
YLELMRHGITDQHFIDDDILRISKETGIKVIATNDTHYLEQDNAEAHEAFMCIAMNKEFD
DPNRLRHSVHEFYLKSPSQMSDLFADIPEAISNTQEIVEKCNLEIKLGDPTPPKFKFTKE
YAAKEGLSFESDDEFFAYHSRKGLEKRLLNVDVSKHEEYRARLEREIDIICKMKFPGYML
IVWDFIREAKERGVPVGPGRGSAAGSLVAFSLFITDIDPMPYNLLFERFLNPERISMPDI
DIDFCQSRRGEIIDYVVEKYGRYNVAQVITFGKLLAKGVIRDVARVLAIPYAEADAMAKL
IPDELGITLNGVGVEGEEGYKPGAFQKEPKLRELIESSPKMQRVWKFALALEGLNRNSGM
HAAGVVISDEELWHKTPLYQPSGEDHLVTQYSLNYLEDVDLIKFDFLGLKTLTVIDNALK
LIKLRYQKEIDFTTIDMNDPKVYELIQSGETVGLFQIESSGMQSLNERLKPTNFEDLIAV
LALYRPGPMESGMLDDFIERKNGLKEISYFFDEFTKPLRPILEPTYGVIVYQEQVMQIVQ
AIGGFSLGEADLIRRAMGKKKIDYMKQKAEEFAQGAVNQGLDRAHAIELFGLIEKFAGYG
FNKSHSAAYAMVTFETAYLKCYYPQEFMAALLTSEQDNTDKIVKYIDEVKRLGLKLLPPS
IQHSLIEFSAITDTDGQEAILFGMGAIKGVGNAAISKILEAREGALFADMSDFISRIDSS
KVNKKVLESFIKSGSFDDFGYSRRALLENIDSIIEASAECSRAKKMAEYSLFGDAEEMMT
VQVSIENIPEFDNKRMLELEKETIGFYISGHPLDAFRAEIDEMNYTLSSERDQVEDGSKA
LFIGKVEGITEKISKKGNKFGIISLMDFHGSMELTVFEKQLELLSRMDLEKPLCFKVDVS
NDGQNTKMRVMKIMELGEAKKEKIETKVIEVPQEPKVLLLDLSDDTSKLEFLYQIVRQNG
GRRPLHLVITSKLQDVVIETGFCVDDSIDEQIAALEYVKVV
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacataccgtacacccatttacatttacataccgaatattcactccttgatggc
gccaataaaataggcaagctggtcaaaaaactgaaatcccaaggcgtgacttctgtggcg
atcaccgatcatggaaacatgtttggcgcgattgatttttacaaaacgatgcgcaaagag
ggcatcaagcccatcatcggcatggaagcgtacatccacaaccaagaggacattggcgat
aaaaccacgaaacagcgttttcacctctgtttgtacgctaaaaatgaggtcggctataaa
aacttgatgtacctagcgtcgatgagctatatcaaaggtttttactattatccacgtatc
aataaacagatgttgcgcgaacacgcggaagggctggtgtgctcgggtgcatgtctgcaa
ggtgaagtcaactggcatctcaatctcaacaacaaacgcaatgtccaatttggcgcgaaa
gggtatgaacgtgctaaagaggtagcgcttgagtacaaagaaatttttggtgaggacttt
tacttagagctaatgcgtcatggcattaccgatcaacacttcatcgacgatgatattttg
cgcatctccaaagagacgggcataaaagtcatcgccaccaacgatacccactacctagag
caagacaatgccgaagcgcacgaggcatttatgtgtattgcgatgaacaaagagtttgat
gacccgaatcgtctgcgtcactccgtgcatgagttttatctcaaatcgccctctcaaatg
agcgacctttttgcggatattcctgaagcgatttccaatacgcaagagattgtggagaag
tgcaatttggagattaaactgggcgatccaacccctcctaaatttaaatttaccaaagag
tatgccgccaaagaggggcttagctttgagagcgatgacgagttttttgcgtaccacagt
cgtaaaggactcgaaaagcgtcttttaaatgttgatgtcagtaagcatgaagagtatcgc
gccagactggaacgggaaattgacattatctgcaagatgaaattccctggttatatgctc
atcgtttgggattttatccgtgaagccaaagagcgcggtgttcctgtgggaccaggccgt
ggttcagcagcaggtagtttggtcgcattttcgctttttatcactgacattgacccgatg
ccctataacctgctcttcgagaggttcttgaatcctgaacgtattagtatgcccgatatt
gatattgacttttgccagagtcgtcgtggtgaaatcattgattacgttgtcgaaaaatac
ggacgttacaatgtggcacaagtcattacctttggtaagctgttagccaaaggtgtcatt
cgtgatgttgcgcgcgttctcgccattccttatgccgaagccgatgcaatggcaaaactg
atccccgatgaactgggcatcacacttaatggtgtgggtgttgagggagaagaagggtac
aaaccaggcgcctttcaaaaagagccaaaacttcgtgaactcattgaaagcagtccgaag
atgcaacgcgtgtggaagtttgcgttagcacttgaaggactgaaccgcaactcaggcatg
catgccgcgggtgtggttattagcgatgaagagttgtggcacaaaacaccgctttaccaa
ccttctggcgaagatcacttagtgacgcagtattcactcaactatcttgaagatgtggac
ttaatcaagttcgacttcttgggtctgaagaccctcacggtgattgataatgcgcttaag
ctcattaaacttcgttatcaaaaagagattgattttacgaccattgatatgaatgatccg
aaggtgtatgagctgattcaaagtggcgaaacggtgggattgttccaaatcgagtcaagc
ggtatgcagtctttgaatgaacgcctcaaaccgaccaactttgaagacctgatcgccgta
ctcgcgctttaccgtccaggtccgatggaatcaggcatgctcgatgactttatcgaacgt
aaaaacggtctcaaagaaatcagttatttttttgacgagtttacgaagcctcttcgcccg
attttagagccaacgtatggggttattgtttaccaagaacaggttatgcagatcgttcaa
gcgattggtggttttagccttggcgaagcggatttgattcgtcgtgcgatgggtaagaaa
aagatcgactacatgaaacaaaaagccgaagagttcgcgcaaggtgcggtcaaccaaggc
ttagatcgtgcccatgcgattgagctctttggcttaattgagaagtttgcgggatatggt
tttaacaaatcgcactccgcggcctatgcgatggttacatttgaaacggcgtatttgaaa
tgctactatccacaagagtttatggcagcgcttcttacttcagagcaagacaataccgat
aaaattgttaagtacatcgatgaggtcaaacgtctgggattgaagcttttaccaccatcc
attcagcacagtttgatcgaatttagtgcgatcaccgataccgatggacaagaggcgatt
ctctttggcatgggtgcgatcaaaggtgtaggcaatgcggcgatcagcaagattttagaa
gcgagagagggcgcactttttgcggatatgagtgattttatctcccgaattgatagctcc
aaggtcaataaaaaagtgttagaatcgtttatcaaatcaggtagttttgatgactttggc
tactccagacgtgcgttacttgaaaatattgatagcatcattgaagcgagtgcggagtgc
agccgtgccaaaaaaatggcggagtattcgctctttggtgatgccgaagagatgatgacg
gtacaagtgagcattgaaaatatccctgaatttgataacaaacgcatgcttgaactggaa
aaagagacgattggtttttacatctcagggcatcctttggacgcatttagagcggaaatt
gatgaaatgaattacacgctttccagcgagcgcgatcaggttgaagatggaagtaaagcc
ctttttattggaaaagtggaaggcattacggaaaaaattagcaaaaaaggcaacaagttt
ggcatcatctcgctcatggattttcatggttcaatggaattaaccgtttttgaaaaacag
ctggaattactctcccgaatggatttggaaaaaccactctgctttaaagttgacgtgagc
aacgatgggcagaataccaaaatgcgtgtcatgaaaatcatggagcttggtgaagcgaaa
aaagagaagattgaaaccaaagtcattgaagtgccccaagagcccaaagtgcttctgctt
gatctgagtgatgatacgagtaagctggaatttttataccaaattgtgcgccaaaatgga
gggcgtagaccgcttcatctcgttatcacctcaaaattgcaagatgtcgtgatcgagaca
ggcttttgtgtcgatgatagtattgatgaacagatcgcagcacttgagtatgttaaggtc
gtctaa
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