Sulfurospirillum sp. 1612: SFB89_00015
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Entry
SFB89_00015 CDS
T11274
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sulu Sulfurospirillum sp. 1612
Brite
KEGG Orthology (KO) [BR:
sulu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sulu03032
]
SFB89_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
sulu03400
]
SFB89_00015 (gyrB)
Enzymes [BR:
sulu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SFB89_00015 (gyrB)
DNA replication proteins [BR:
sulu03032
]
Prokaryotic type
DNA Topoisomerases
SFB89_00015 (gyrB)
DNA repair and recombination proteins [BR:
sulu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SFB89_00015 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
WVV36431
LinkDB
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Position
2680..4989
Genome browser
AA seq
769 aa
AA seq
DB search
MSNYGADNIKVLKGLEAVRKRPGMYIGDTNINGLHHLIYEVVDNSIDESMAGYCDTINVE
ITNYGSAIISDNGRGIPVEMHPTEKISAATVVLTVLHAGGKFDKDTYKVSGGLHGVGVSV
VNALSSKLIATICRDGKEYRQEFATGIPQNSLEVVKNTRKRGTTIEFWPDPDIFETTDFV
YETLAKRFKEIAYLNPKIKIQFKDNRDGKNETFHFEGGIKQFVEDLNKKDQISAPFYFNN
TTDDVEVDISLLYNTGYTETLLSFVNNIKTPEGGTHESGFRAGLTRAIVNYINANANVRE
KDIKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGNTYVKPIVQKMTFENLVKYFEENP
IEAKAVMDKALSAARGREAAKKARDLTRRKDSMNIGTLPGKLADCQSKDATISELYLVEG
DSAGGSAKQGRDRVFQAILPLKGKILNVEKSRLDKILKSDEIKNMITALGCGIGEEFNEE
KLRYHKLIIMTDADVDGSHIQTLLLTFLFRFLKPVVEKGYVYLAQPPLYRYKKGKKEIYL
KDDAELNALLISSGIESVHFEGIGTNDLIDYFKIIAAYRNILKELEKRYSVIEVIRFLIE
NPDIISLDNQAMYVKIEAFITSIGYNILNKIIDEETIHLYIQTKDGLEELLLNDDFFTNP
LYEEALYIQTKIKEKELNLEGQDPVDVLNNIEKFAKKGAYIQRYKGLGEMNPEQLWETTM
NPENRRLLKVNIEDMELASDTFTLFMGDEVEPRRKYIQDHAKDVKHLDV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattatggtgcagataatataaaagttttaaaaggtctcgaagctgttcgaaaa
agaccagggatgtatatcggtgatacgaatatcaatggattacatcaccttatttatgaa
gtcgttgataactctattgatgaatccatggcaggatattgtgatacgattaatgtcgag
attaccaattatggctcagctatcatttctgataatggtaggggtattcctgtggagatg
catccgacagaaaaaatatctgccgcaactgttgttttaaccgtcttgcatgcagggggt
aaatttgacaaagatacctataaagtcagtgggggacttcatggtgtgggtgtttcggtt
gttaatgcactctcctcaaaactgattgcaaccatttgtagagatggcaaagagtatcga
caagaatttgctacgggtattcctcaaaatagtttagaagtggttaaaaacacaagaaaa
cgaggaacaaccatagaattttggccagatcctgatatctttgaaacgaccgattttgtt
tatgaaactttggcaaaacgatttaaagagattgcgtatcttaatcctaaaataaaaata
caatttaaagacaatcgagatggtaaaaatgaaacctttcattttgaagggggtattaaa
caatttgtagaagatctcaataaaaaagatcaaatatctgctccattttattttaacaat
accacagatgatgttgaagtcgatatctcactcttatataatacgggttatactgaaacc
ctactctcttttgttaataatatcaaaactccagaaggcggaactcatgagagtggtttt
cgtgcgggactcacacgggcgattgttaattatatcaatgccaatgctaatgtgagagaa
aaagatatcaaaattaccggagatgatgttcgtgagggattgattgctgtggtgagtgtc
aaagtaccagagcctcaatttgaaggacaaaccaaaggaaaattaggaaatacctatgtg
aaaccaattgttcaaaaaatgacttttgaaaatttggtgaaatattttgaagaaaatcca
attgaagccaaagctgtcatggacaaagcattgtcagctgctagaggaagagaagcggct
aaaaaagcacgggatttaacgcgtcgaaaagactctatgaatatcggaacacttccgggt
aaattggcagattgtcaaagtaaagatgcgacgattagtgaattgtatcttgtcgaaggg
gatagtgctggcggtagtgctaaacaaggacgagatcgtgtttttcaagcgattttacca
ctcaaaggtaagattttaaatgttgaaaaaagtagattggataaaattttaaaatcagat
gaaattaagaacatgattaccgcactaggatgtggtatcggtgaagaattcaatgaagaa
aaactccgctatcacaaactcattatcatgaccgatgcggatgtggatggtagtcatatt
caaacgctattattgacatttttattcagatttttaaaaccggttgttgaaaaaggttat
gtttatttagcgcaaccaccattgtatcgatataaaaaaggtaaaaaagagatttatctc
aaagatgatgcagaactcaatgcgctgttgatttcaagtggaatcgagagtgttcatttt
gaaggtattggcacgaatgatttgattgattatttcaaaattattgccgcatatcgaaac
atactcaaagagttggaaaaacgctattctgttattgaagtgattcgatttttgattgaa
aatcctgatattatttcattagacaatcaggccatgtatgtaaaaatagaagcatttatt
acgagtattggttataatattttgaataaaatcattgatgaagagaccatccatctctat
attcaaaccaaagatggattggaagagttacttttaaatgatgatttttttacaaatcca
ctctatgaagaagcgctttatattcaaacaaagattaaagaaaaagaattgaatcttgaa
ggacaagatccggttgatgtcttaaataatattgaaaaatttgctaaaaaaggtgcttat
attcaacgttacaaaggtttaggtgaaatgaatcctgaacaactttgggaaacaacgatg
aatccagaaaaccgaagattgttgaaagtaaatattgaagatatggaacttgcaagcgac
acttttacactctttatgggagatgaagtggaacctagacgaaaatatattcaagatcat
gcgaaagatgtcaaacatctggatgtttaa
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