Sulfurospirillum sp. 1612: SFB89_00335
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Entry
SFB89_00335 CDS
T11274
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sulu Sulfurospirillum sp. 1612
Pathway
sulu00300
Lysine biosynthesis
sulu00470
D-Amino acid metabolism
sulu01100
Metabolic pathways
sulu01110
Biosynthesis of secondary metabolites
sulu01120
Microbial metabolism in diverse environments
sulu01230
Biosynthesis of amino acids
Module
sulu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sulu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SFB89_00335 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SFB89_00335 (dapF)
Enzymes [BR:
sulu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SFB89_00335 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WVV36486
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Position
69616..70362
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AA seq
248 aa
AA seq
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MHVSKYNASGNDFVIFHTFKQEDRSALARRLCHRQSGVGADGLIVVLPHETYDFQWQFYN
SDGSMAAMCGNGTRACAHYAFQNGLAPANMSFLTQAGVIRSSVEGDIVETQLSASKKLRE
PFVYEGKTWYFYDTGVPHLVTFTENLDDFDLTLASKLRYEHNANVNFASITPKGLLVRTY
ERGVEGETLACGTGMAACFRSAYDQGNIPDKIKVYPRSNEELALRIEEGQLYFKGKVSKV
FDTSIDAL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtatctaaatataatgccagtggcaatgattttgtgatatttcataccttcaag
caagaagaccgtagtgcccttgctaggagattgtgtcaccgacaaagtggcgtaggcgcc
gatggcttgattgtggtgctccctcatgaaacgtatgatttccaatggcagttttacaat
agtgatggcagtatggccgccatgtgtgggaatggaacccgtgcgtgtgcgcattatgcg
tttcaaaatggtctagctcctgctaatatgagctttttgacacaagcgggagtgattcgc
tcatccgttgaaggggatatcgtagagactcaattgagtgcgagtaaaaaactgcgtgag
ccctttgtgtatgaggggaaaacgtggtatttttatgatacgggtgttcctcatcttgtg
acttttactgaaaatcttgatgattttgatctgaccttggcatcaaagctacgttatgaa
cataatgccaatgtgaattttgcttccattacgccaaaaggcctgttggtgcgcacttat
gaacgaggagtagagggggagactttggcttgtggtacagggatggccgcgtgttttcgt
agcgcttatgatcaaggaaatatcccagataaaatcaaagtatatcctcgtagcaacgaa
gagttagcactcagaatcgaagaggggcaactctatttcaaaggaaaggtgtcaaaagtg
tttgacacgagtattgatgcactttaa
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