Sulfurospirillum sp. 1612: SFB89_05365
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Entry
SFB89_05365 CDS
T11274
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
sulu Sulfurospirillum sp. 1612
Pathway
sulu02020
Two-component system
sulu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sulu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SFB89_05365
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SFB89_05365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulu03021
]
SFB89_05365
Transcription machinery [BR:
sulu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SFB89_05365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
WVV37438
LinkDB
All DBs
Position
1083001..1084275
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AA seq
424 aa
AA seq
DB search
MKLRVNTELATKQKLSSTLRSWLPILQSDLESLQETLEPFVQENPFIEVKAGQEKVAPQY
QKKSFFEQVSKDSVSTIIEALSVDKKSLYEVLYEQINPPLFPTQISQNIAYDILENIDHE
GYFDVTMQRQIAEKNHCDIATVDKIRKRFAYLSPSGVGALDFKESFLFQLEELEVEDATY
KLVCKIMENFEAVESFASDPNFNNALKILKKFKNPPAIDFMEENTLIIPDIFIFNTDGNI
EVRLNDAYYPDILLDTTGLDDKEEFVSKKIKEAKDLIDALEMRKATLYKIGLLIVEYQYD
FFFGSAIKPMKLKDLAVELGRNQSTISRAISGKYISCDRGVIPLKHFFATAVEENLSNSA
IKDYMCELVKYEDRKKPLSDMKLLEAIEKKFGIKIVRRTITKYRQQFNIAGSSERKKLYA
LKCL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattaagagtaaacacagagcttgccaccaaacaaaaactctcatctactcttagg
agttggttgccaattttacaatcagatcttgaatcactacaagagacgcttgagcccttc
gttcaagaaaatccttttattgaagtcaaagcaggccaagaaaaagtcgccccgcaatat
cagaaaaaaagtttttttgaacaagtttcaaaggattcagtttctactattatagaggca
ttaagtgttgataaaaagtccttatatgaggtgctttatgaacaaattaatccaccgctt
ttcccgacacaaatctctcaaaatattgcgtatgatattttagaaaatattgatcatgag
ggatattttgatgtcacgatgcaaaggcaaatagctgaaaaaaatcattgtgatatcgct
actgttgacaaaatacgcaaaaggtttgcgtatctctcaccatcaggcgtgggagctttg
gattttaaagaatctttcttatttcaacttgaagagttggaagtcgaagatgcgacctac
aagcttgtttgtaagattatggagaattttgaagccgttgagtcttttgcttcagacccc
aatttcaataatgcgctaaaaattttgaaaaaattcaaaaatcctccggctattgatttt
atggaagaaaatacccttattatccctgatatttttattttcaataccgacggtaatatt
gaagtgcgattaaatgatgcctattatcctgatatattactagacacaacaggacttgat
gataaagaagaatttgtctccaaaaaaatcaaagaagccaaagatttgattgatgcttta
gagatgcgcaaagcaacgctttataagattgggctgttgattgtagagtatcaatatgac
tttttctttggttctgccatcaaaccgatgaaactcaaagacctcgctgtggaattaggg
cgaaatcaatcgacaatctcgcgcgcgatatcgggtaaatatatctcttgtgaccggggt
gttattcctttaaaacacttctttgccacagccgttgaagaaaacctctccaacagtgca
atcaaagattatatgtgcgaactggtcaaatatgaagatcgtaaaaaaccactcagcgat
atgaaactcttagaagcgatagaaaaaaagtttggcatcaaaatcgtgcgacgtaccatc
acaaaatatcgccaacaattcaatatcgcaggctcatcggagcgcaaaaaactttatgcg
ttaaaatgcctgtaa
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