Sulfurospirillum sp. 1612: SFB89_07160
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Entry
SFB89_07160 CDS
T11274
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sulu Sulfurospirillum sp. 1612
Brite
KEGG Orthology (KO) [BR:
sulu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sulu03016
]
SFB89_07160 (truD)
Enzymes [BR:
sulu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SFB89_07160 (truD)
Transfer RNA biogenesis [BR:
sulu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SFB89_07160 (truD)
Prokaryotic type
SFB89_07160 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WVV35515
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All DBs
Position
complement(1427806..1428888)
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AA seq
360 aa
AA seq
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MKRLFFLNHAPVNVVFTKNSNDFVVNELPLYEFSGQGEHLVLHVRKKDMTTWDMIQKLSE
VCGAKVRDFGYAGLKDKDGMTTQYLSIHKKFETKLKDFHDEKIKILSTTYHDNKIRMGHL
KGNRFFIRLKKVNKVDALKLQNALKTLAKEGCPNYFGYQRFGKTGDNSAIGKAILEGTRK
ERRMKMKNFFISAYQSDLFNQWLSSRIQISHTLSSFEDAEVMDLLGLSKDEIKMLRAQKQ
FLKLFQGDVAHHYPAGKAFLCEDVAKESQRFSDHDITLTGWLPGSRSMRGEGYAKVLDDK
IYGEAEAYLKQMNGSRRFAWIFLTDVESRYKEEENWLEIHFSLPKGSYATVVLEELTHKL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgattatttttcctcaatcacgctcctgtcaatgttgtatttactaaaaattct
aatgattttgtcgtcaacgaacttccattgtatgaattttcaggacaaggggagcatctg
gtcttgcatgttcgtaaaaaagatatgacaacgtgggatatgattcaaaaactgagtgaa
gtttgtggtgctaaggtgcgagattttggttatgctgggttaaaagacaaagatggcatg
accacacaatacctctcaatacacaaaaaatttgaaaccaaactcaaagattttcatgat
gaaaaaataaagattctctctactacctatcatgataacaaaattaggatgggacatctc
aaaggcaatcgattttttattcgactcaaaaaagttaataaagtcgatgccctcaaacta
caaaatgcactcaaaaccttggcgaaagagggatgtccaaactattttggttatcagcgt
tttggaaaaactggcgacaatagtgcgattgggaaagcgattttagaagggacacgaaaa
gagcgtcggatgaaaatgaaaaatttctttatcagcgcgtatcaaagcgatcttttcaat
caatggctctcttctcgtattcaaatctcacacacgttatccagttttgaagatgccgaa
gtgatggatttgcttggtttatctaaagatgagattaaaatgctgcgtgcccaaaaacaa
tttttgaaattatttcaaggggacgtggcccatcattaccctgccgggaaagcattttta
tgtgaggatgtagctaaagagtcacagcgtttttctgatcatgatatcacactcaccgga
tggcttcccggaagtagaagtatgcgaggagagggctatgccaaagtcttggatgataag
atttacggtgaggcagaagcgtacttaaaacagatgaatggttcacggcgttttgcttgg
atatttttaaccgatgtagaatcgcgctataaagaagaagaaaattggctcgaaatccac
tttagtttgcctaaaggttcttatgcgacagtggtactcgaagaattaacacacaaatta
tga
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