Sulfurospirillum sp. 1612: SFB89_08100
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Entry
SFB89_08100 CDS
T11274
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sulu Sulfurospirillum sp. 1612
Pathway
sulu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sulu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SFB89_08100 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulu03400
]
SFB89_08100 (uvrB)
DNA repair and recombination proteins [BR:
sulu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SFB89_08100 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SFB89_08100 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
SWI2_SNF2
AAA_30
T2SSE
Kinesin
DUF87
UB2H
AAA_22
Microtub_bd
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WVV35697
LinkDB
All DBs
Position
1624079..1626055
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AA seq
658 aa
AA seq
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MTTFQLNSKFSPTGDQPKAITKLANSIKQGNRYQTLIGVTGSGKTFTMANIIQKLQMPTL
IMTHNKTLAAQLYSEFRSFFPKNHVEYFISYYDYYQPEAYIPRADLFIEKDSAINEELER
LRLSATASLLSFDDVICVASVSANYGLGNPNEYKSMVQALEIGQNINQKKLLLQLVDMGY
KRNDAFFDRGCFRVNGDVLDIHPAYSEDEAIRIEFFGDEIESIYYFEVLSNQKIKNVDKV
IIYAANQFIVGQERLKIAMKQIEEELERRLEEFQRANKLVEYQRLKSRVEFDLEMLQATG
ACKGVENYARYLTGIKEGETPYSLFDYFEAMGRDYLVIVDESHVSLPQFRGMFAGDRSRK
EVLVEYGFRLPSALDNRPLMFDEFIDKAPHYLFVSATPKELELELSGSHTAEQIIRPTGL
LDPKVEIIDSENQVAWLFDEIKKTVAVNERVLVTVLTKKMAEELSRYYNELGLKVKYMHS
EIDAIERNQIIRALRNGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLMQT
MGRAARNTHGRVLMFAKKITDSMKRAIETTEKRRKIQEAYNQEHHITPVTTTRALDENLK
VEELGDIYNTYDKKDKIPPSQKKEIIKSLSLQMHKAAKDLEFEKAAKLRDEIAKLRKL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctttcaattaaatagcaaattttctcccacaggggaccaaccaaaagccatc
accaaactcgcaaattctattaaacagggcaaccgctatcagacactcatcggagtcacg
ggcagcggcaagaccttcacgatggccaatatcatccaaaaacttcagatgcccaccctt
atcatgacacacaacaaaacactcgccgcacagctgtatagtgagtttcgaagctttttt
cctaaaaatcatgttgagtatttcatctcttattatgattattatcaacctgaagcttac
atcccaagagcggatttgtttatcgaaaaagatagtgcgatcaatgaagagttagagcgc
ctgcgattgagcgctactgcatcacttcttagttttgatgatgtcatctgtgtggcttcg
gtatcggccaattatggattgggaaatccaaatgagtacaaaagcatggtacaagctctt
gaaatcggacaaaacatcaatcaaaagaaactcttgttgcaacttgtcgatatgggctac
aaaagaaatgatgccttttttgacagaggttgctttagagtcaatggcgatgttttggat
atccatcctgcttatagcgaagatgaagccatccgcatcgaatttttcggcgatgagatt
gagagtatttactactttgaagtactcagtaatcaaaaaattaaaaatgttgacaaagtc
atcatctacgccgccaatcaattcattgtaggacaagagcgcctcaaaattgcgatgaaa
caaatcgaagaagagttagagcgaagacttgaggaatttcaaagagccaataaactcgtc
gaataccaacgcttaaaaagtcgcgttgaatttgatcttgagatgctccaagccacgggt
gcgtgcaagggtgtggaaaattatgcacggtatctcaccggtatcaaagagggagagacg
ccttattctttgtttgattattttgaagccatgggacgtgattatctggtcatcgtcgat
gaatctcatgtgagtttgccacaatttcgcggtatgtttgcaggtgatcgcagtcgtaaa
gaggtgctggtagagtatggttttagactgcctagtgcgcttgataaccgtcctttgatg
tttgatgagtttattgacaaagcgccacactatctttttgtctcagcaacaccaaaagag
ctagagttagaactctcaggttctcacactgccgagcaaatcatcagacccaccggattg
cttgatcccaaagtggagattatcgacagtgaaaaccaagtcgcttggctctttgatgag
atcaaaaaaaccgtagcggtcaatgagcgtgttttggtcacggtactcaccaaaaagatg
gcagaagagctcagtcgctactacaacgaactcggactcaaggtcaaatacatgcactca
gaaatcgatgccatcgagcgcaatcaaatcatccgggcccttcggaatggagagtttgac
gtgttggttgggattaacctactaagagagggtttggatttgcctgaagtctcactcgtg
gccattcttgatgcggataaagagggttttttacgcagtgaaaccagcttgatgcagacg
atgggaagagcggcgagaaatacacacggtcgcgtcttgatgtttgctaaaaaaatcaca
gattccatgaaacgcgccatcgaaacaacagaaaaaagaagaaaaatccaagaggcgtac
aatcaagaacatcatatcacgccggtgacgacaacccgagcacttgatgagaacttaaaa
gtcgaagagttgggtgatatttataatacttatgataaaaaagataagatacccccaagt
cagaaaaaagagattatcaaatcactcagccttcaaatgcataaagcggcaaaggattta
gagtttgaaaaagcggcaaaattgcgagatgagatcgccaaactcagaaaattgtaa
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