Sulfurospirillum sp. 1612: SFB89_09615
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Entry
SFB89_09615 CDS
T11274
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sulu Sulfurospirillum sp. 1612
Brite
KEGG Orthology (KO) [BR:
sulu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sulu03009
]
SFB89_09615 (rimO)
Enzymes [BR:
sulu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SFB89_09615 (rimO)
Ribosome biogenesis [BR:
sulu03009
]
Prokaryotic type
ribosomal protein modification factors
SFB89_09615 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WVV35987
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All DBs
Position
1933692..1935005
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AA seq
437 aa
AA seq
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MEKTLYLVSLGCNKNLVDSEVMLGRLKDYKLINDPTTADVLIVNTCGFIGAAKEESLNTI
FSLHDQRKKDSLLVVSGCLTQRYQEQLTQELKEVDIFTGVGDYDKIDEIIEERKNRFSNS
TYLINEAQRVVTGSSYHAYVKLSEGCNQRCSFCAIPGFKGKLKSRELSSIKKELETLVAQ
GFYDFSFISQDSSSYLRDQGKKEGLIDFIDMVESIKGVKSARILYLYPTTASNALIQKII
DSTVFHNYFDMPIQHISDTMLKRMRRGAGKERIMEQLHMMRHAKDSFLRTGFIVGHPGET
EEEFEELCAFVEDFDFDRISIFAYSDEEDTLAYEMEEKIDKKTINKRIKKLNKIVEDKIQ
KSLETEIGKEIALVAEHESSEHEFFIGAKKLSWDRDIDGEILINESLIGDLKFGQCYMAT
ITQLAGDKLLATVTQPA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacactctatctcgtctcactaggttgcaacaaaaacttagtagattccgaa
gtcatgctgggcagactcaaggattataaactcatcaacgaccccacaactgctgatgtt
ttgattgtcaatacctgcggcttcatcggcgcagcaaaagaagagagtctcaatacaata
ttctcgcttcatgatcaaaggaaaaaagattctctacttgtggtgagtggttgtctgacg
caacgctatcaagagcaactcacccaagaattaaaagaagtagatatcttcaccggtgtg
ggagattatgataagattgatgaaattatagaagagagaaaaaacagattttcaaactcc
acttacctcatcaatgaagcccaacgcgtcgtcacgggttcttcgtatcatgcgtatgtc
aagctcagtgaaggatgcaatcaacgttgtagtttttgtgccattcctggatttaaaggg
aagctaaaatcacgtgaattatcctctatcaaaaaagagttggaaactttggtagcacaa
ggtttttatgattttagttttatctcacaagatagcagttcgtatcttcgagaccaaggt
aagaaagaaggtttgattgattttattgatatggtcgaaagcataaaaggcgtcaaaagt
gcacgaattttatatctgtatcctaccacagctagcaatgcactcatccaaaaaatcatc
gactctacagtatttcacaactattttgatatgccaatccaacacatcagcgataccatg
ctcaaaagaatgcgacggggagcaggaaaagagcggattatggaacaacttcacatgatg
cgccatgcgaaagatagctttttaagaacgggctttatcgtcggacatcccggtgagacg
gaagaagaatttgaagagttgtgtgcttttgtcgaggattttgattttgatcgtatcagt
atctttgcctattctgatgaggaagataccctcgcctatgagatggaagagaaaatcgac
aaaaaaacgattaacaaacgcatcaaaaaactcaacaaaatcgtagaagataaaatccaa
aaaagtctcgaaacagagattggcaaagagattgccctagtcgcagaacacgagagtagc
gagcatgagttttttatcggcgccaaaaagttatcgtgggatcgtgatatcgatggggaa
attctcatcaatgagtcattgataggtgacctgaaatttggacaatgctacatggcaacc
atcacacaattagccggagataaacttcttgcaaccgttacccagcctgcatga
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