Sulfitobacter sp. TCYB15: ABM428_00445
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Entry
ABM428_00445 CDS
T10553
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
suly Sulfitobacter sp. TCYB15
Brite
KEGG Orthology (KO) [BR:
suly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
suly03016
]
ABM428_00445 (truB)
Enzymes [BR:
suly01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABM428_00445 (truB)
Transfer RNA biogenesis [BR:
suly03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABM428_00445 (truB)
Prokaryotic type
ABM428_00445 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
XCF10339
UniProt:
A0AAU8C375
LinkDB
All DBs
Position
94867..95784
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AA seq
305 aa
AA seq
DB search
MGRRRKGRDISGWLVVDKPAGPTSTTVVNKVRWALNANKAGHAGTLDPEATGVLAIALGE
ATKTVPFITDAMKAYEFTVRLGIATNTDDAEGEVIATSELRPDDDAIKDALGKFIGDIQQ
VPPQFSAVKIDGQRAYKLARDGETMELAARPLFVEQLLLVDRPDADHVTLEMVCGKGGYV
RSIARDLGQALGCLGHVRELRRIWSGPFEASEGLTLAQIEEMARTDALDAHLLPLEQGLQ
DLPEVKATPEGATRLRNGNPGMVIAHDVEYGDEVWASFEGRAVAVGRFKAGELHPSRVFN
QPGSA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcaggcgcaagggacgggatatttcggggtggttggtggtggacaagcccgct
ggcccgacctctacgaccgtggtgaacaaggtccgttgggcgctgaacgcgaataaggcg
ggccatgcgggcacccttgaccccgaagccaccggcgttctggcaatcgcgcttggcgag
gcgaccaagacggtgccctttatcacggacgcgatgaaagcctatgagtttacggtccgc
cttgggatcgcgacaaataccgatgatgccgagggcgaggtcatcgcaacctcggagctg
cggcccgatgacgacgcgatcaaggatgctttgggcaaatttatcggtgacatccagcag
gtgccgccgcagttttccgcagtgaagatcgacggccagcgcgcctacaaactggcgcgc
gacggtgaaacgatggaactggcagcccgcccgctttttgtcgaacagctactgctggtg
gaccgccccgatgccgaccacgtgacgttggagatggtgtgcggcaagggcggctatgtc
cggtcgattgcgcgcgatctgggacaagccttggggtgtctgggccacgtgcgcgaattg
cgccgcatctggtcgggcccgttcgaggcctctgaagggctgacgctggcgcagatcgaa
gagatggcgcgcacagacgctttggacgcgcatttgctgccgttagagcaagggttgcag
gacctgccagaggtgaaagccacgccagagggggccactcgtctgcgcaacggcaacccc
ggcatggtgatcgcccatgacgttgaatatggcgacgaggtctgggcgtcgtttgagggc
cgcgccgttgctgtaggacgtttcaaggcgggcgaattgcatccgtcgcgtgtgttcaac
cagcccggttctgcgtga
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