Sulfitobacter sp. TCYB15: ABM428_00470
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Entry
ABM428_00470 CDS
T10553
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
suly Sulfitobacter sp. TCYB15
Pathway
suly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABM428_00470 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suly03019
]
ABM428_00470 (pnp)
03016 Transfer RNA biogenesis [BR:
suly03016
]
ABM428_00470 (pnp)
Enzymes [BR:
suly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABM428_00470 (pnp)
Messenger RNA biogenesis [BR:
suly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABM428_00470 (pnp)
Transfer RNA biogenesis [BR:
suly03016
]
Prokaryotic type
tRNA degradation factors
ABM428_00470 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
XCF10344
UniProt:
A0AAU8C310
LinkDB
All DBs
Position
98586..100721
Genome browser
AA seq
711 aa
AA seq
DB search
MFNVTKKSMQWGEETLTLETGKVARQADGSVIATLGETSVMANVTFARQQKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFRGPIGACRVGFEDGDYVLNPTVDDMQDLRLNPDQR
LDLVVAGTKEAVMMVESEAYELSEEEMLGAVKFAHEQIQPVIDLIIDLAEDAAKEPFDFQ
PVDYSDLSAAVKAAGEDAMRAAFAIADKQERTAAVAAARETIKAALTEEQLEDANLGSAL
KGLEASILRGDVVKTGKRIDGRKTDEIRDIVAETGILPRTHGSSLFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFMLHYNFPPYSVGEVGRVGGPGRREIGHGKLAWRALQAVLPA
STDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLILEEDGSYA
ILSDILGDEDHLGDMDFKVAGTEAGITSLQMDIKIAGITPEIMEKALAQAKAGRVHILGE
MNKAISGAGEFSVHAPRIETMQIPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASPNGDSIKKAYDMIWSIVAEPEEGAVYTGTVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQETGEEIKKEEGGEA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgtaacgaaaaaatccatgcagtggggcgaagagacgctgacactggaaact
ggcaaagtggcccgtcaggcagacggttcggtgattgcgacactgggcgaaaccagcgtc
atggcgaacgtcacctttgcacgccagcaaaaacccggtcaggacttctttccgctgacc
gtccactaccaagagaaatactacgccgccggtaaagtaccgggtggcttcttcaagcgt
gaggcccgccccaccgagaaggaaaccctgacagcccgtctgatcgaccgtccgatccgt
ccgctgttcgttcccggcttcaaaaacgaagttctggtgatgtgtaccgttctcagccac
gatctggtcaatgaccccgatatggtcgccatgatcgctgcctccgcagcgctgaccatt
tccggcgcgccattccgtggcccgatcggtgcctgccgcgttggtttcgaggatggcgat
tacgttctgaacccgaccgtcgacgacatgcaggacctgcgcctgaaccctgatcaacgt
cttgatctggttgtcgctggcaccaaagaagccgtgatgatggttgaatccgaagcctat
gagctgtcggaagaagaaatgctgggtgcggtgaaattcgcgcacgagcaaatccagcct
gttatcgacctgatcattgatctggccgaagacgctgcgaaagagccgtttgacttccag
ccggttgactattcggacctgtccgctgctgtcaaagccgctggcgaagacgccatgcgc
gccgcttttgcaatcgccgacaagcaagagcgcaccgccgctgttgccgctgcccgcgaa
acaatcaaagccgcgctgaccgaagagcaactggaagacgcgaacctcgggtccgcactg
aaaggcctcgaagcgtccatcctgcgtggtgacgtggttaaaaccggtaagcgtatcgac
ggccgtaagaccgacgaaatccgcgacatcgtggccgaaaccggcatcctgccccgtaca
cacgggtcgtcgctgttcacacgtggcgaaacacagggtctggttgtgaccactttgggc
accggcgatgacgaacagttcatcgatgcgctgcacggcaacttcaaatccaacttcatg
ctgcactataacttcccgccctattcggttggtgaagttggccgtgtcggtggccccggc
cgtcgcgaaatcggtcacggcaagttggcttggcgtgcgttgcaggcggttctgcctgcc
tccaccgacttcccctacaccatccgcgttgtgtccgagatcactgaatcgaacggctcc
agctcgatggcgtcggtttgcggtggctccttgtccatgatggacgcaggcgttccattg
aaagcacccgtcgcgggtgttgccatgggtctgatcctggaagaagacggctcctacgcg
atcctgtccgacatcttgggtgacgaagaccacctgggcgacatggactttaaagtggcc
ggtaccgaagcaggtatcacgtcgctgcagatggacatcaagatcgccggcatcaccccc
gagatcatggagaaagctctggcacaagccaaagcgggccgtgtgcacatcctgggcgag
atgaacaaagccatctccggcgcgggtgaattctctgtccacgctccacgcatcgaaacg
atgcagatcccaaccgacaagatccgtgaagtgatcgggtccggcggtaaagtgatccgc
gagatcgttgaagtgtccggcgcgaaagtcgacatcaacgacgaaggcatcatcaaaatc
gcatcgccaaacggcgactcgatcaagaaagcctatgacatgatctggtccatcgtggcc
gagcctgaagaaggtgcggtttacaccggtaccgtcgtcaagatcgttgatttcggtgcc
ttcgtgaacttctttggcaagcgcgacggtctggtacacgtatcccaaatcgaaaaccgc
cgcctgaaccacccttcggatgttctgaaggaaggtcaggaagtgaaagtgaagctgctt
ggctttgacgatcgcggcaaggtgcgcctgtcgatgaaagttgtcgatcaggaaaccggc
gaagaaatcaagaaagaagaaggcggcgaagcgtaa
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